Author

Warren Winick‐Ng

Max Delbrück CenterORCID 0000-0002-8716-5558Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:gene regulatory network inference· 3 Assay:Hi-C· 2 Organism:mouse· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Alexander KukaleviD· 3 shared Ana PomboiD· 3 shared Andrea M. ChiarielloiD· 3 shared Dominik SzabóiD· 3 shared Ibai Irastorza-AzcárateiD· 3 shared Mario NicodemiiD· 3 shared Simona BiancoiD· 3 shared Altuna AkaliniD· 2 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Alexander KukalevORCID

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3 papers

Recent·Most cited

An integrated view of the structure and function of the human 4D nucleome

Job Dekker, Betül Akgöl Oksuz, Yang Zhang, Ye Wang, Miriam K. Minsk, Shuzhen Kuang, Liyan Yang, Johan Harmen Gibcus, Nils Krietenstein, Oliver J. Rando, Jie Xu, Derek H. Janssens, Steven Henikoff, Alexander Kukalev, Andréa Willemin, , Feng Yue

The paper integrates 4D Nucleome data to analyze 3D genome structure and function in human cells, revealing chromatin domains, loops, and interactions, and showing how genetic variants affect genome folding.

Nature · Dec 17, 2025Peer-reviewedGenomics

A single dose of cocaine rewires the 3D genome structure of midbrain dopamine neurons

Dominik Szabó, Vedran Franke, Simona Bianco, Mykhailo Y. Batiuk, Eleanor J. Paul, Alexander Kukalev, Ulrich Pfisterer, Ibai Irastorza-Azcárate, Andrea M. Chiariello, Samuel Demharter, Luna Zea-Redondo, José P. López‐Atalaya, Mario Nicodemi, Altuna Akalin, Konstantin V. Khodosevich, , Ana Pombo

This study shows that a single cocaine exposure causes long-lasting 3D genome structure changes in midbrain dopamine neurons, affecting gene regulation and synaptic plasticity.

bioRxiv · May 10, 2024 · PreprintGenomics

Cell-type specialization in the brain is encoded by specific long-range chromatin topologies

Warren Winick‐Ng, Alexander Kukalev, Izabela Harabula, Luna Zea Redondo, Dominik Szabó, Mandy Meijer, Leonid Serebreni, Yingnan Zhang, Simona Bianco, Andrea M. Chiariello, Ibai Irastorza-Azcárate, Luca Fiorillo, Francesco Musella, Christoph J. Thieme, Ehsan Irani, , Ana Pombo

The paper investigates cell-type specific 3D chromatin structures in the brain using immunoGAM, finding TAD melting, neuron-specific contacts, and compartmentalization patterns related to gene expression and neurodegenerative diseases.

bioRxiv · Apr 2, 2020 · PreprintMolecular Biology