Author

Linxuan Zhao

Uppsala UniversityORCID 0000-0002-8883-5656Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 3 Assay:ATAC-seq· 2 Approach:statistical model· 2 Research Focus:clustering· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:mouse· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Pengwei XingiD· 3 shared Xingqi CheniD· 3 shared Miao ZhaoiD· 2 shared Chao-Long Meng· 1 shared E‐Jean TaniD· 1 shared Fredrik J. SwartlingiD· 1 shared Fuyou ZhouiD· 1 shared Gabriela RoséniD· 1 shared

Activity by Year

2021-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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3 shared papersGenomics

Pengwei XingORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Profiling chromatin accessibility in formalin-fixed paraffin-embedded samples

Hua Zhang, Vamsi Krishna Polavarapu, Pengwei Xing, Miao Zhao, Lucy Mathot, Linxuan Zhao, Gabriela Rosén, Fredrik J. Swartling, Tobias Sjöblom, Xingqi Chen

This paper introduces FFPE-ATAC, a method for profiling chromatin accessibility in formalin-fixed paraffin-embedded tissues, demonstrating its effectiveness with colorectal cancer samples.

Genome Research · Jan 1, 2022Peer-reviewedGenomics

Extrachromosomal DNA is associated with chromothripsis events and diverse prognoses in gastric cardia adenocarcinoma

Xueke Zhao, Pengwei Xing, Xin Song, Miao Zhao, Linxuan Zhao, Yonglong Dang, Ling-Ling Lei, Rui‐Hua Xu, Wen-Li Han, Panpan Wang, Miaomiao Yang, Jing-Feng Hu, Kan Zhong, Fuyou Zhou, Xue-Na Han, , Lidong Wang

The paper investigates extrachromosomal DNA (ecDNA) in gastric cardia adenocarcinoma, finding associations with chromothripsis, DNA damage, and prognosis based on oncogene amplicons.

Nature Communications · Nov 11, 2021Peer-reviewedGenomics

Conserved cell-lineage controlled epigenetic regulation in human and mouse glioblastoma stem cells determines functionally distinct subgroups

Xi Hua Lu, Naga Prathyusha Maturi, Malin Jarvius, Linxuan Zhao, Yuan Xie, E‐Jean Tan, Pengwei Xing, Mårten Fryknäs, Lene Uhrbom, Xingqi Chen

The paper identifies functionally distinct subgroups of glioblastoma stem cells (GSCs) by analyzing cross-species chromatin accessibility, showing that epigenetic regulation is controlled by developmental origin.

bioRxiv · Feb 22, 2021 · PreprintNeuroscience