Author

Sajib Chakraborty

German Cancer Research CenterORCID 0000-0002-8900-503XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Approach:experimental assay· 1 Organism:human· 1 Organism:mouse· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Alina PandeleiD· 1 shared Annette Schneider· 1 shared Aso O. Mohammed· 1 shared Christian EhltingiD· 1 shared Christopher Krolla· 1 shared Clemens KreutziD· 1 shared Daniel SeehoferiD· 1 shared Depro DasiD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperCancer Biology

Alina PandeleORCID

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2 papers

Recent·Most cited

Spatially confined niches support hypoxia-associated transcriptional plasticity contributing to malignant progression in IDH-mutant gliomas

Depro Das, Alina Pandele, Vatsal D. Jariwala, Nishitha S Ghariwala, Aso O. Mohammed, Tonmoy Das, Christopher Krolla, Saif Mukramoon Arosh, Naiem Hossain, Mohammad Al Shhab, Md. Ismail Hosen, Stuart J. Smith, Juergen Grauvogel, Ioannis Vasilikos, Roland Roelz, , Sajib Chakraborty

This study identifies hypoxia-associated transcriptional plasticity in IDH-mutant gliomas, showing microglia-driven quiescent-to-activated transitions that drive malignant progression.

bioRxiv · Jun 3, 2026 · PreprintCancer Biology

Identification of Interleukin1β as an Amplifier of Interferon alpha-induced Antiviral Responses

Katharina Robichon, Tim Maiwald, Marcel Schilling, Annette Schneider, Joschka Willemsen, Florian Salopiata, Melissa Teusel, Salopiata, Clemens Kreutz, Christian Ehlting, Jun Huang, Sajib Chakraborty, Xiaoyun Huang, Georg Damm, Daniel Seehofer, , Ursula Klingmüller

This study identifies IL1β as an amplifier of IFN-induced antiviral responses through mathematical modeling and experimental validation.

PLoS Pathogens · Oct 1, 2020Peer-reviewedSystems Biology