Dongming Fang

The paper introduces CycSim, a context-aware simulator for long-read mapping that improves parameter optimization, achieving faster mapping and better accuracy across different sequencing platforms.

The paper presents haplotype-resolved T2T assemblies of two MZ twins, revealing genomic and epigenetic divergence, including structural variation and DNA methylation differences.

The paper uses single cell transcriptomes to study how regulatory networks change during the development of Kranz anatomy in C4 grasses.

The paper presents a telomere-to-telomere genome assembly for Oryza longistaminata, revealing structural variations and gene duplications that may contribute to its advantageous traits.

This study assembled two chromosome-scale genomes of the fall armyworm in China, revealing gene family expansions and population origins to aid in pest management.