Author

Arianna Ceccarelli

University of OxfordORCID 0000-0002-9598-8845Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Organism:C. elegans· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Assay:Hi-C· 1 Organism:mouse· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Alicja Brożek· 1 shared Amanda G. FisheriD· 1 shared Andreas Christ Sølvsten JørgenseniD· 1 shared Ian McFarlane· 1 shared Ilinca PatrascaniD· 1 shared James W. D. KingiD· 1 shared Juan M. VaquerizasiD· 1 shared Mark HintzeiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperSystems Biology

Alicja Brożek

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2 papers

Recent·Most cited

Locus-specific spatial and transcriptional dynamics direct T cell lineage choice in the thymus

Ilinca Patrascan, James W. D. King, Noura Maziak, Rebecca Marie Crossley, Samuel Johnson, Arianna Ceccarelli, Ian McFarlane, Ya Guo, Mohammad Mahdi Karimi, Amanda G. Fisher, Ruth E. Baker, Juan M. Vaquerizas, Matthias Merkenschlager

The paper investigates how spatial and transcriptional dynamics at Cd4 and Cd8 loci influence T cell lineage choice in the thymus, revealing locus-specific chromatin environments that drive differentiation.

bioRxiv · Oct 27, 2026 · PreprintGenetics

Inference of the core gene regulatory network underlying seam cell development in Caenorhabditis elegans

Alicja Brożek, Arianna Ceccarelli, Andreas Christ Sølvsten Jørgensen, Mark Hintze, Michalis Barkoulas, Vahid Shahrezaei

The paper infers the core gene regulatory network governing seam cell development in C. elegans using smFISH data and computational models.

bioRxiv · Nov 28, 2023 · PreprintSystems Biology