Vasanth R. Singan

Genic Position and Methylation Context Shape DNA Methylation-Expression Relationships in Rice Internode Development

The paper investigates DNA methylation-expression relationships in rice internode development using RNA-seq and bisulfite sequencing, finding specific methylation contexts correlate with gene expression patterns.

Multi-season analysis reveals hundreds of drought-responsive genes in sorghum

This study identifies hundreds of drought-responsive genes in sorghum using multi-season transcriptomic data from field experiments.

A novel regulator of the fungal phosphate starvation response revealed by transcriptional profiling and DNA affinity purification sequencing

The paper identifies NUC-1 as a bifunctional transcription factor regulating phosphate starvation response in Neurospora crassa, with NUC-3 acting as a brake on the response during prolonged starvation.

Genetic mapping of flowering time and plant height in a maize Stiff Stalk MAGIC population

The paper develops a MAGIC population in maize to map flowering time and plant height, finding that predictive models perform better when trained on direct data rather than indirect data from hybrids.

Genomics Characterization of an Engineered Corynebacterium glutamicum in Bioreactor Cultivation under Ionic Liquid Stress

The paper resequences and analyzes transcriptomic changes in an engineered C. glutamicum strain under bioreactor conditions with and without ionic liquid stress.