Author

Alicia McCarthy

University at Albany, State University of New YorkORCID 0000-0003-0060-3592Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 4 Genetics· 1

Signature Assays, Organisms & Methods

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Organism:Drosophila· 5 Approach:experimental assay· 5 Research Focus:cell type annotation· 3 Research Focus:differential expression· 3 Assay:bulk RNA-seq· 2 Assay:DNA methylation· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2

Frequent Co-Authors

Prashanth RanganiD· 5 shared Elliot Todd MartiniD· 3 shared Kahini Sarkar· 3 shared Justin CamachoiD· 2 shared Maitreyi Upadhyay· 2 shared Shane M. BreznakiD· 2 shared Siu Wah Wong-Deyrup· 2 shared Alex A. LemusiD· 1 shared

Activity by Year

2020-2022 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 32 mutual co-author links

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5 shared papersDevelopmental Biology

Prashanth RanganORCID

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5 papers

Recent·Most cited

Developmental BiologybioRxivPreprintJan 31, 2022

Oo-site: A dashboard to visualize gene expression during Drosophila oogenesis reveals meiotic entry is regulated post-transcriptionally

Elliot Todd Martin, Kahini Sarkar, Alicia McCarthy, Prashanth Rangan

Oo-site visualizes gene expression and translational data during Drosophila oogenesis, revealing meiotic genes are regulated post-transcriptionally.

DOI 10.1101/2022.01.31.478569

Drosophilabulk RNA-seq

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Developmental BiologyDevelopmentPeer-reviewedDec 8, 2021

MSL3 coordinates a transcriptional and translational meiotic program in female Drosophila

Alicia McCarthy, Kahini Sarkar, Elliot Todd Martin…·Prashanth Rangan

This study identifies MSL3 as a master regulator coordinating transcription and translation during meiosis in female Drosophila and shows its conserved role in mouse spermatogenesis.

36 citations

Drosophilamouse

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Developmental BiologybioRxivPreprintOct 31, 2021

A feedback loop between heterochromatin and the nucleopore complex controls germ-cell to oocyte transition during Drosophila oogenesis

Kahini Sarkar, Noor M. Kotb, Alex A. Lemus…·Prashanth Rangan

3 citations

Drosophilaexperimental assay

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Developmental BiologyCurrent BiologyPeer-reviewedMay 13, 2021

RNA degradation sculpts the maternal transcriptome during Drosophila oogenesis

Patrick Blatt, Siu Wah Wong-Deyrup, Alicia McCarthy…·Prashanth Rangan

The paper identifies RNA degradation mechanisms during Drosophila oogenesis that sculpt the maternal transcriptome by removing specific RNAs expressed in germline stem cells.

33 citations

Drosophilabulk RNA-seq

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GeneticsG3 Genes Genomes GeneticsPeer-reviewedMar 25, 2020

Tunable Transcriptional Interference at the Endogenous Alcohol Dehydrogenase Gene Locus in Drosophila melanogaster

Victoria Jorgensen, Jingxun Chen, Helen Vander Wende…·Elçin Ünal

The paper shows that transcriptional interference at the endogenous Adh locus in Drosophila melanogaster is developmentally regulated and tunable through distal promoter activity.

10 citations

Drosophilaexperimental assay

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