Alex A. Lemus

CIPHR-FISH improves microbiome imaging by enabling strain-level taxonomic resolution through machine learning and probe design, revealing spatial community structures in zebrafish.

This paper introduces a sparse and low-rank Poisson unmixing method to improve fluorescence image unmixing accuracy in low signal-to-noise regimes with overlapping fluorophores.

The paper estimates glutamate transporter surface density in mouse hippocampal astrocytes across ages and sub-cellular compartments, finding age-related changes and compartment-specific differences.