Author

Pamela Milani

Massachusetts Institute of TechnologyORCID 0000-0003-0250-0474Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Immunology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:human· 3 Assay:ATAC-seq· 2 Research Focus:differential expression· 2 Assay:proteomics· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

Berhan Mandefro· 2 shared Clive Niels SvendseniD· 2 shared Ernest FraenkeliD· 2 shared Miriam Adam· 2 shared Renan Escalante-ChongiD· 2 shared Aaron P. Frank· 1 shared Alex Lenail· 1 shared Alyssa N. CoyneiD· 1 shared

Activity by Year

2016-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersNeuroscience

Berhan Mandefro

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Author profile →

3 papers

Recent·Most cited

ImmunologybioRxivPreprintJun 2, 2026

Immune activation during broadly neutralizing antibody-mediated HIV suppression prior to post-intervention control

Julia A. Wagner, Demi A. Sandel, Ravi K. Patel…·Rachel Lena Rutishauser

This study shows that bNAb-mediated HIV suppression is linked to increased immune activation compared to ART suppression, with unique transcriptional patterns in controllers.

DOI 10.64898/2026.05.29.728863

humanproteomics

𝕏 PostBluesky

NeurosciencebioRxivPreprintNov 1, 2020

An integrated multi-omic analysis of iPSC-derived motor neurons from C9ORF72 ALS patients

Loren Ornelas, Emilda Gomez, Lindsay Panther…·Leslie Michels Thompson

The paper performs an integrated multi-omic analysis of iPSC-derived motor neurons from C9ORF72 ALS patients to identify dysregulated pathways and validate them in vivo and in postmortem data.

3 citations

humanDrosophila

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GenomicsScientific ReportsPeer-reviewedMay 5, 2016

Cell freezing protocol optimized for ATAC-Seq on motor neurons derived from human induced pluripotent stem cells

Pamela Milani, Renan Escalante-Chong, Brandon C. Shelley…·Ernest Fraenkel

The paper develops a freezing protocol for ATAC-Seq on motor neurons derived from human induced pluripotent stem cells, showing that slow-cooled cryopreserved samples yield comparable results to fresh cells.

DOI 10.1038/srep25474

humanATAC-seq

𝕏 PostBluesky