Author

Berhan Mandefro

Cedars-Sinai Medical Center

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Genomics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:ATAC-seq· 2 Approach:experimental assay· 2 Organism:human· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Organism:Drosophila· 1 Research Focus:gene regulatory network inference· 1 Assay:proteomics· 1

Frequent Co-Authors

Clive Niels SvendseniD· 2 shared Ernest FraenkeliD· 2 shared Miriam Adam· 2 shared Pamela MilaniiD· 2 shared Renan Escalante-ChongiD· 2 shared Aaron P. Frank· 1 shared Alex Lenail· 1 shared Alyssa N. CoyneiD· 1 shared

Activity by Year

2016-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersNeuroscience

Clive Niels SvendsenORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

An integrated multi-omic analysis of iPSC-derived motor neurons from C9ORF72 ALS patients

Loren Ornelas, Emilda Gomez, Lindsay Panther, Aaron P. Frank, Susan Lei, Berhan Mandefro, Maria G. Bañuelos, Brandon Shelley, Julia Kaye, Leandro de Araújo Lima, Stacia K. Wyman, Ryan G. Lim, Jie Wu, Jennifer T. Stocksdale, Malcolm Casale, , Leslie Michels Thompson

The paper performs an integrated multi-omic analysis of iPSC-derived motor neurons from C9ORF72 ALS patients to identify dysregulated pathways and validate them in vivo and in postmortem data.

bioRxiv · Nov 1, 2020 · PreprintNeuroscience

Cell freezing protocol optimized for ATAC-Seq on motor neurons derived from human induced pluripotent stem cells

Pamela Milani, Renan Escalante-Chong, Brandon C. Shelley, Natasha L. Patel-Murray, Xiaofeng Xin, Miriam Adam, Berhan Mandefro, Dhruv Sareen, Clive N. Svendsen, Ernest Fraenkel

The paper develops a freezing protocol for ATAC-Seq on motor neurons derived from human induced pluripotent stem cells, showing that slow-cooled cryopreserved samples yield comparable results to fresh cells.

Scientific Reports · May 5, 2016Peer-reviewedGenomics