Shai Pilosof

The paper shows that adaptive mutations in E. coli alter metabolite correlation networks, improving fitness through network rewiring without directly affecting SAM metabolism.

This paper introduces a spatially explicit framework for predicting missing ecological interactions using matrix decomposition, showing improved predictive performance when incorporating spatial context.

This study introduces a microbe-plasmid model to analyze plasmid invasion and eradication, showing that competition structure leads to bistability and sudden regime shifts.

This study shows bacterial interactions drive community responses to environmental changes more than plasmid dynamics in a three-member bacterial community.