Author

Vasista Adupa

University of GroningenORCID 0000-0003-0750-7931Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:protein folding & dynamics· 2 Assay:protein structure· 2 Research Focus:cell signaling & trafficking· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1 Research Focus:host-pathogen & immune response· 1 Approach:mechanistic / dynamical model· 1 Approach:statistical model· 1

Frequent Co-Authors

Maurice DekkeriD· 2 shared Patrick R. OnckiD· 2 shared Johan David PoletiD· 1 shared S. J. Chen· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

4 top collaborators · 5 mutual co-author links

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2 shared papersBiophysics

Maurice DekkerORCID

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2 papers

Recent·Most cited

BiophysicsbioRxivPreprintAug 27, 2026

A two-bead-per-aminoacid coarse-grained MD model with hydrogen bonding (2BPA-HB) to probe DNAJB6b-mediated suppression of polyglutamine aggregation in Huntingtons disease

Vasista Adupa, Johan David Polet, Maurice Dekker, Patrick R. Onck

This paper develops a coarse-grained MD model to study DNAJB6b's role in suppressing polyglutamine aggregation in Huntington's disease, finding that DNAJB6b co-condensates with polyQ and inhibits amyloid formation.

1 citation

protein structuremechanistic / dynamical model

𝕏 PostBluesky

BiophysicsbioRxivPreprintApr 8, 2026

Modeling disorder, secondary structure formation, and amyloid growth in FG-nucleoporins

Maurice Dekker, S. J. Chen, Vasista Adupa, Patrick R. Onck

This paper introduces a computational model to simulate the dual behavior of FG-nucleoporins between disordered and fibrillar states, showing their ability to form condensates and amyloid-like structures.

1 citation

yeastprotein structure

𝕏 PostBluesky