Author

Daniel Markett

University of California, San FranciscoORCID 0000-0003-0752-6681Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 1 Genomics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Research Focus:differential expression· 3 Research Focus:gene regulatory network inference· 3 Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:human· 2 Approach:statistical model· 2 Assay:CRISPR screen· 1

Frequent Co-Authors

Albertas NavickasiD· 3 shared Hani GoodarziiD· 3 shared Kristle GarciaiD· 3 shared Benjamin HänischiD· 2 shared Matvei KhoroshkiniD· 2 shared Sean Bong LeeiD· 2 shared Tanvi V. JoshiiD· 2 shared Andrey BuyaniD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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3 shared papersCancer Biology

Albertas NavickasORCID

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3 papers

Recent·Most cited

Cancer BiologyCell Reports MedicinePeer-reviewedJan 23, 2026

Systematic annotation of orphan RNAs reveals blood-accessible molecular barcodes of cancer identity and cancer-emergent oncogenic drivers

Jeffrey Wang, Jung Min Suh, Brian J. Woo…·Hani Goodarzi

The paper systematically identifies and characterizes cancer-emergent oncRNAs across 32 tumor types, showing they act as blood-accessible molecular barcodes for cancer identity and prognosis.

5 citations

mousebulk RNA-seq

𝕏 PostBluesky

GenomicsbioRxivPreprintApr 26, 2025

Discovery of a tRNA-regulatory transcription factor that suppresses breast cancer metastasis

Siyu Chen, Daniel Markett, Mehran Karimzadeh…·Hani Goodarzi

The paper identifies ZZEF1 as a tRNA-specific transcription factor that suppresses breast cancer metastasis by regulating tRNA-LysUUU expression and affecting codon-specific translation.

2 citations

humanbulk RNA-seq

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Systems BiologyNature CommunicationsPeer-reviewedSep 9, 2024

Systematic Identification of Post-Transcriptional Regulatory Modules

Matvei Khoroshkin, Andrey Buyan, Martin Dodel…·Hani Goodarzi

The paper systematically identifies post-transcriptional regulatory modules by integrating multimodal data on RBP interactions and functions.

18 citations

humanCRISPR screen

𝕏 PostBluesky