Tim M. Blakely

The paper presents a connectomic dataset of a larval zebrafish brain, enabling circuit analysis through synaptic and neuronal annotations.

The paper presents a connectomic analysis of a human cerebral cortex fragment, revealing structural and connectivity features of neurons and synapses.

The paper presents a vCLEM protocol to map Aβ and pTau in AD mouse hippocampus connectomics data, revealing new molecular and structural alterations.

The paper develops a compression method for connectomic images using denoising and standard codecs, achieving 17-fold compression with minimal loss in 3D reconstruction and synaptic detection.

Flood-filling networks with local section realignment segment a forty-teravoxel whole-brain Drosophila electron microscopy volume, making circuit reconstruction an order of magnitude faster than manual tracing.

The paper presents a detailed connectome of the adult Drosophila central brain, including new methods for data analysis and biological insights into neural circuit organization.

A dense electron-microscopy reconstruction of half the fly central brain, with nearly every cell typed and queryable online, turns months of tracing partners into a database lookup.

This paper introduces flood-filling networks for automated neuron reconstruction, achieving high precision in tracing neurites from electron microscopy data.