Petr Šulc

This paper introduces an experimental method to reconstruct free-energy landscapes of rotary DNA nanomachines using electric-field biasing and statistical reweighting, revealing energy barriers and design modifications' effects.

This paper introduces mRNA-OG, a programmable mRNA nanostructure that affects protein expression, delivery, and immune response through its architecture.

This paper develops a DNA-templated chiral metamaterial array for secure optical information storage using plasmonic chirality to encode binary data.

The paper quantifies viral mimicry in genomes across species and shows how repetitive elements maintain pathogen-like features under selection.

This paper introduces MATE magnetic cascades for nucleic acid detection, achieving improved sensitivity and faster assay times through mismatch-assisted toehold exchange.

This study shows that base distribution along an invading strand strongly affects DNA-RNA strand displacement kinetics, enabling design of sequences with reaction rates spanning two orders of magnitude.

This study uses single-molecule force spectroscopy to analyze the kinetics of toehold-mediated strand displacement, revealing sequence-dependent dynamics and load effects in DNA and RNA interactions.

The paper introduces a method to compare immune repertoires by identifying conserved macro-level features, enabling assessment of repertoire completeness from sampled sequences.

ExpertRNA is a modular framework that combines multiple rewards and prediction algorithms to improve RNA secondary structure prediction accuracy.

The paper analyzes CpG dinucleotide distribution in SARS-CoV-2, finding low average CpG content with fluctuations linked to immune evasion and replication strategies.

Complex+ integrates and curates protein interaction data to help researchers identify reliable interactors and guide future experiments.