Author

Melike Pekmezci

University of California, San FranciscoORCID 0000-0003-2548-8359Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 2

Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Approach:genetic perturbation / CRISPR· 1 Research Focus:host-pathogen & immune response· 1 Organism:mouse· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Aiman SolimaniD· 1 shared Amir Kazemi· 1 shared Audrey Lam· 1 shared Betsy Barnick· 1 shared Debapriya DuttaiD· 1 shared Harish N. VasudevaniD· 1 shared Iowis ZhuiD· 1 shared Jin Young YooiD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

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10 top collaborators · 21 mutual co-author links

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1 shared paperCancer Biology

Aiman SolimanORCID

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2 papers

Recent·Most cited

Cancer BiologybioRxivPreprintOct 16, 2025

In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics

Jin Young Yoo, Sabrina Akter, Qianying Zuo…·Zeynep Madak‐Erdogan

This paper introduces GIS-ROTA, a framework that integrates biological knowledge with spatial transcriptomics to identify functionally relevant spatial domains in breast tumors.

DOI 10.1101/2025.10.16.682879

humanspatial transcriptomics

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Cancer BiologyInternational Journal of Radiation Oncology*Biology*PhysicsPeer-reviewedSep 1, 2025

Interferon signaling underlies radiotherapy responses in malignant peripheral nerve sheath tumors (MPNSTs)

Iowis Zhu, Julian Chien, Kanish Mirchia…·Harish N. Vasudevan

This study identifies interferon signaling as a key mediator of radiotherapy response in MPNSTs, linking it to T-cell recruitment and clinical outcomes.

DOI 10.1016/j.ijrobp.2025.06.3529

mousehuman

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