Author

Denis Voronin

New York Blood CenterORCID 0000-0003-2652-0787Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:cell type annotation· 1 Assay:DNA methylation· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Elodie GhediniD· 3 shared Adam B. GeberiD· 2 shared Alexandra GroteiD· 2 shared Canhui LiuiD· 1 shared David M. CurraniD· 1 shared Drew R. JonesiD· 1 shared Hailey SounartiD· 1 shared John ParkinsoniD· 1 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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3 shared papersGenomics

Elodie GhedinORCID

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3 papers

Recent·Most cited

GenomicsNature CommunicationsPeer-reviewedOct 14, 2023

Miniature spatial transcriptomics for studying parasite-endosymbiont relationships at the micro scale

Hailey Sounart, Denis Voronin, Yuvarani Masarapu…·Stefania Giacomello

The paper demonstrates miniature spatial transcriptomics to study gene expression patterns in filarial worms and their Wolbachia endosymbionts, revealing spatial gene localization and interactions.

7 citations

spatial transcriptomicsexperimental assay

𝕏 PostBluesky

Systems BiologyeLifePeer-reviewedAug 10, 2020

Modeling the metabolic interplay between a parasitic worm and its bacterial endosymbiont allows the identification of novel drug targets

David M. Curran, Alexandra Grote, Nirvana Nursimulu…·John Parkinson

The paper models the metabolic interactions between a parasitic worm and its bacterial endosymbiont to identify potential drug targets.

24 citations

humanstatistical model

𝕏 PostBluesky

BioinformaticsPLoS neglected tropical diseasesPeer-reviewedJun 23, 2020

Prediction pipeline for discovery of regulatory motifs associated with Brugia malayi molting

Alexandra Grote, Yichao Li, Canhui Liu…·Elodie Ghedin

The paper develops a motif prediction pipeline to identify regulatory motifs in Brugia malayi, focusing on those involved in the L3-L4 molt stage.

74 citations

DNA methylationstatistical model

𝕏 PostBluesky