Author

Anastasia A. Teterina

University of OregonORCID 0000-0003-3016-8720Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Bioinformatics· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 4 Organism:C. elegans· 2 Approach:experimental assay· 2 Research Focus:genome assembly· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:deep learning· 1

Frequent Co-Authors

Andrew D. KerniD· 2 shared John H. WillisiD· 2 shared Murillo F. RodriguesiD· 2 shared Nathaniel S. PopeiD· 2 shared Patrick C. PhillipsiD· 2 shared Aaron P. RagsdaleiD· 1 shared Ahmed HasaniD· 1 shared Alice PearsoniD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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2 shared papersEvolutionary Biology

Andrew D. KernORCID

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4 papers

Recent·Most cited

Evolutionary BiologybioRxivPreprintMay 31, 2026

GPU accelerated population genetics statistics using pg_gpu

Nathaniel S. Pope, Angel G. Rivera‐Colón, Ananya Kapoor…·Andrew D. Kern

pg_gpu accelerates population genetics statistics on GPUs, achieving significant speedups over CPU implementations while maintaining accuracy.

1 citation

humanwhole-genome sequencing

𝕏 PostBluesky

GenomicsbioRxivPreprintJun 25, 2024

Pervasive conservation of intron number and other genetic elements revealed by a chromosome-level genomic assembly of the hyper-polymorphic nematode Caenorhabditis brenneri

Anastasia A. Teterina, John H. Willis, Charles F. Baer, Patrick C. Phillips

This study presents a chromosome-level genome assembly of C. brenneri, revealing conserved intron number patterns and genome organization despite high genetic diversity.

DOI 10.1101/2024.06.25.600681

C. eleganswhole-genome sequencing

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BioinformaticsbioRxivMar 3, 2023

Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations

M. Elise Lauterbur, Maria Izabel A. Cavassim, Ariella L. Gladstein…·Ilan Gronau

The paper expands the stdpopsim species catalog and improves genome simulations by adding non-crossover recombination and species-specific annotations, making simulations more realistic for non-model organisms.

1 citation

whole-genome sequencingstatistical model

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GenomicsGeneticsPeer-reviewedFeb 28, 2020

Chromosome-level assembly of the Caenorhabditis remanei genome reveals conserved patterns of nematode genome organization

Anastasia A. Teterina, John H. Willis, Patrick C. Phillips

The paper presents a chromosome-level genome assembly of C. remanei using long-read sequencing and chromatin conformation capture, revealing conserved genomic organization patterns with C. elegans.

42 citations

C. eleganswhole-genome sequencing

𝕏 PostBluesky