Author

Yousef Alayoubi

Max Planck Institute for Heart and Lung ResearchORCID 0000-0003-4119-3577Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Immunology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:scRNA-seq· 2 Research Focus:batch correction / integration· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

Mario LoosoiD· 3 shared Carsten Tobias KuenneiD· 2 shared Mette Skou BentseniD· 2 shared Angeline UsanayoiD· 1 shared Brenton BrunsiD· 1 shared Christian WaechteriD· 1 shared Diana CamposiD· 1 shared Dlnija MirzaiD· 1 shared

Activity by Year

2023-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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3 shared papersBioinformatics

Mario LoosoORCID

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3 papers

Recent·Most cited

BioinformaticsiSciencePeer-reviewedJun 29, 2026

SC-Framework: A robust and FAIR semi-interactive environment for single-cell resolution datasets

Hendrik Schultheis, Jan Detleffsen, René Wiegandt…·Mario Looso

SC-Framework provides a unified, containerized environment for single-cell data analysis to improve reproducibility and scalability.

3 citationstop 5%

scRNA-seqexperimental assay

𝕏 PostBluesky

ImmunologybioRxivPreprintFeb 20, 2026

Reg3β removes aged neutrophils after myocardial infarction

Holger Lörchner, Laia Cañes Esteve, Julia Detzer…·Thomas W Braun

This study identifies REG3β as a factor that removes aged neutrophils after myocardial infarction, promoting inflammation resolution and cardiac repair.

DOI 10.64898/2026.02.19.706868

mouseproteomics

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BioinformaticsbioRxivPreprintAug 14, 2023

Scanpro: robust proportion analysis for single cell resolution data

Yousef Alayoubi, Mette Skou Bentsen, Mario Looso

Scanpro is a tool for differential proportion analysis in single-cell data, supporting both replicated and unreplicated datasets.

1 citation

scRNA-seqstatistical model

𝕏 PostBluesky