Anshul Sinha

This study investigates prophage induction in human gut metagenomes in response to ciprofloxacin, finding species-specific increases in prophage-to-bacterial host read depth ratios.

This study investigates whether prophage induction contributes to changes in the gut phageome during intestinal inflammation using in vitro and mouse model analyses.

The paper identifies a microbiota-dependent type 3 immune response in mice during weaning that involves γδ T cells, which limit C. difficile growth and maintain intestinal barrier integrity.

This study shows neonatal BCG vaccination expands IL-17/IL-22-producing γδ T cells, mediates protection against TB, and induces a microbiome signature linked to gut-lung axis immunity.

This paper introduces predicted phage host families to improve cross-study comparisons of gut viromes by reducing ecological distances and detecting disease-specific signatures.