Author

Matt Sarrasin

Université de MontréalORCID 0000-0003-4849-0849Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 2 Organism:Arabidopsis· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1 Approach:statistical model· 1

Frequent Co-Authors

Bernd Franz LangiD· 2 shared Agnès ThierryiD· 1 shared Bruce A. CurtisiD· 1 shared Carmen BuchrieseriD· 1 shared Cyril Matthey-DoretiD· 1 shared Gertraud BurgeriD· 1 shared John M. ArchibaldiD· 1 shared Michael W. GrayiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersBioinformatics

Bernd Franz LangORCID

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2 papers

Recent·Most cited

BioinformaticsNAR Genomics and BioinformaticsPeer-reviewedJan 6, 2026

Eukan: a fully automated nuclear genome annotation pipeline for less studied and divergent eukaryotes

Matt Sarrasin, Gertraud Burger, Bernd Franz Lang

Eukan is a genome annotation pipeline that improves accuracy for diverse eukaryotes by integrating RNA-Seq data and consensus modeling, outperforming existing tools in challenging genomes.

DOI 10.1093/nargab/lqag003

whole-genome sequencingstatistical model

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GenomicsGenome ResearchPeer-reviewedSep 1, 2022

Chromosome-scale assemblies of Acanthamoeba castellanii genomes provide insights into Legionella pneumophila infection-related chromatin re-organization

Cyril Matthey-Doret, Morgan J. Colp, Pedro Escoll…·Romain Koszul

The paper presents chromosome-scale genome assemblies of Acanthamoeba castellanii and shows infection-induced chromatin reorganization during Legionella pneumophila infection.

46 citations

Arabidopsiswhole-genome sequencing

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