Author

Tomaž Curk

University of LjubljanaORCID 0000-0003-4888-7256Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Assay:ChIP-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Andrea S. Elser· 1 shared Anob M. ChakrabartiiD· 1 shared Ashok R. VenkitaramaniD· 1 shared Christopher R. SibleyiD· 1 shared Christopher W. J. SmithiD· 1 shared David Perera· 1 shared Denis KutnjakiD· 1 shared Jernej UleiD· 1 shared

Activity by Year

2019-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperGenomics

Andrea S. Elser

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 23, 2026

✦ In-depth digest

Data mining of global sequence datasets markedly expands known diversity within the Tobamovirus genus

Neža Pajek Arambašič, Katarina Bačnik, Luka Kranjc…·Denis Kutnjak

Serratus-guided Snakemake mining, expert curation, clustering and phylogenetic placement identify at least 32 putative novel tobamoviruses in public short-read data, mostly Amazon River metatranscriptomes; a random-forest classifier partly automates curation.

1 citation

virusplant (other)

𝕏 PostBluesky

GenomicsNature Structural & Molecular BiologyPeer-reviewedSep 30, 2019

A systems view of spliceosomal assembly and branchpoints with iCLIP

Michael Briese, Nejc Haberman, Christopher R. Sibley…·Jernej Ule

The paper uses spliceosome iCLIP to map human spliceosome engagement with snRNAs and pre-mRNAs, identifying over 50,000 branchpoints and their associated splicing factor binding patterns.

39 citations

humanChIP-seq

𝕏 PostBluesky