Author

Ying Zhang

University of VirginiaORCID 0009-0000-4391-5516Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Ying Zhang33 papers · Stowers Institute for Medical Research

Biology Disciplines

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Cancer Biology· 2 Biochemistry· 1 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Organism:human· 4 Assay:bulk RNA-seq· 3 Approach:experimental assay· 3 Approach:biophysical modeling· 2 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Research Focus:cancer & tumor microenvironment· 1

Frequent Co-Authors

Collin DubeiD· 2 shared Kadie HudsoniD· 2 shared Markus HafneriD· 2 shared Myron Keith Gibert· 2 shared Pawel MarcinkiewicziD· 2 shared Roger AbounaderiD· 2 shared Shekhar SahaiD· 2 shared Yunan Sun· 2 shared

Activity by Year

2018-2025 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersCancer Biology

Collin DubeORCID

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4 papers

Recent·Most cited

Cancer BiologybioRxivPreprintSep 16, 2025

Gain-of-function mutant p53 regulates long-noncoding RNA LINC00643 to modulate HIF1α in glioblastoma

Ying Zhang, Fang Yuan, Myron Keith Gibert…·Roger Abounader

This study identifies LINC00643 as a target of GOF-MUT-p53 in glioblastoma, showing it suppresses tumor growth by repressing HIF1α under hypoxia.

DOI 10.1101/2025.09.16.676559

humanbulk RNA-seq

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BiochemistrybioRxivPreprintSep 1, 2025

The MLLT3 YEATS domain is a dual reader of histone marks (H3K9/18/27ac/cr) and ncRNA (7SK), linking epigenetic and RNA signaling to regulate hematopoiesis

Adam M. Boulton, Ashish Kabra, Nicholas J. Achille…·John Hackett Bushweller

This study shows the MLLT3 YEATS domain binds both histone marks and the 7SK RNA, influencing hematopoietic lineage commitment and gene expression.

DOI 10.1101/2025.09.01.673558

𝕏 PostBluesky

Cancer BiologybioRxivPreprintApr 1, 2025

Discovery and therapeutic exploitation of Master Regulatory miRNAs in Glioblastoma

Shekhar Saha, Ying Zhang, Myron Keith Gibert…·Roger Abounader

The paper identifies master regulatory miRNAs in glioblastoma and develops a therapeutic delivery method to inhibit tumor growth.

DOI 10.1101/2025.04.01.646663

humanbulk RNA-seq

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BioinformaticsbioRxivPreprintOct 13, 2018

Development of a novel signature of long noncoding RNAs as a prognostic biomarker for esophageal cancer

Yan Miao, Jing Sui, Ying Zhang, Lihong Yin

This study develops a two-lncRNA signature using RNA-Seq data from TCGA to predict overall survival in esophageal cancer patients, showing better survival in low-risk groups.

3 citations

humanbulk RNA-seq

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