Author

Jianhui Li

Centre National de la Recherche ScientifiqueORCID 0009-0001-6253-9808Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 2 Bioengineering· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

Redmond P. SmythiD· 3 shared Ambre AlleoniD· 1 shared Anne-Sophie Gribling-BurreriD· 1 shared Annia Pérez‐RiveróniD· 1 shared Benjamin VoisiniD· 1 shared Benoît BessoniD· 1 shared Carine MeigniniD· 1 shared Christian DebryiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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3 shared papersMicrobiology

Redmond P. SmythORCID

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3 papers

Recent·Most cited

MicrobiologyAntiviral ResearchPeer-reviewedSep 2, 2026

Field-isolate recombinant tick-borne encephalitis viruses define reporter-stability guidelines for antiviral testing in flaviviruses

Benoît Besson, Damien Mouton, Yamina Boukenadel…·Sébastien Pfeffer

This paper develops recombinant tick-borne encephalitis viruses with reporter genes to guide antiviral testing, finding that Nluc is more stable than eGFP in certain conditions.

DOI 10.1016/j.antiviral.2026.106528

experimental assaydrug response / drug discovery

𝕏 PostBluesky

BioengineeringbioRxivPreprintMar 25, 2026

Influenza Virus Infection of an Immunocompetent Organotypic Model of the Human Respiratory Mucosa

Annia Pérez‐Riverón, Emma Deiss, Ambre Alleon…·Vincent Flacher

The paper develops an immunocompetent 3D model of human respiratory mucosa to study influenza virus infection and immune responses.

DOI 10.64898/2026.03.24.713934

humanbulk RNA-seq

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MicrobiologyNucleic Acids ResearchPeer-reviewedMay 23, 2025

Visualizing the transcription and replication of influenza A viral RNAs in cells by multiple direct RNA padlock probing and in-situ sequencing (mudRapp-seq)

Shazeb Ahmad, Jianhui Li, Joél Schaust…·Redmond P. Smyth

This study introduces mudRapp-seq to visualize influenza A viral RNA transcription and replication at the single-cell level, revealing early mRNA expression and differential segment expression.

4 citations

virusspatial transcriptomics

𝕏 PostBluesky