Author

Renee Mapa

Lehigh UniversityORCID 0009-0001-8351-7464Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioengineering· 1 Evolutionary Biology· 1 Genetics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Assay:imaging· 3 Organism:Arabidopsis· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:dimensionality reduction· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Johanna E. KowalkoiD· 3 shared Alli Kimmel· 2 shared Stefan Choy· 2 shared Anette E. SchragiD· 1 shared Aswin Abraham· 1 shared Aubrey Manning· 1 shared Beau A. AlwardiD· 1 shared Benjamin W. HaydockiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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3 shared papersBioengineering

Johanna E. KowalkoORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

NeurosciencebioRxivPreprintJun 16, 2026

The ENIGMA-PD-WML Pipeline: A Containerized, User-Friendly Approach for Accurate, Standardized Segmentation of White Matter Lesions in Multi-Site MRI Data

Sarah Al–Bachari, Shauna Angell, Aswin Abraham…·Hamied A. Haroon

DOI 10.64898/2026.06.11.731538

imagingexperimental assay

𝕏 PostBluesky

BioengineeringNature BiotechnologyPeer-reviewedJun 9, 2026

Hybrid Solid-Liquid Optics Enable Scalable, High-Resolution, Multi-Immersion Light-Sheet Microscopy

Cheng Gong, Pauline Affatato, Matt Fay…·Raju Tomer

This paper introduces a new optical framework and imaging devices that enable scalable, high-resolution, multi-immersion light-sheet microscopy for biological samples.

DOI 10.1038/s41587-026-03172-7

𝕏 PostBluesky

GeneticsbioRxivPreprintDec 30, 2025

CRISPR screening reveals genetic regulators associated with the evolution of eye degeneration

Devin Shennard, Charlotte Mulliniks, Estephany Ferrufino…·Johanna E. Kowalko

The paper identifies genetic regulators of eye degeneration in cavefish using CRISPR screening and functional assays.

2 citations

Arabidopsisbulk RNA-seq

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Evolutionary BiologybioRxivPreprintJul 7, 2025

Automated profiling of social behaviors to assess the genetic basis of evolution of aggressive behaviors in A. mexicanus

Renee Mapa, Stefan Choy, Mia Lapko…·Johanna E. Kowalko

The paper develops an automated machine learning pipeline to quantify aggression-related behaviors in A. mexicanus and finds behavioral differences between surface and cave fish, with correlations suggesting shared genetic mechanisms.

DOI 10.1101/2025.07.07.663556

Arabidopsisimaging

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