Author

Blanka Majchrzycka

Berlin Institute of Health at Charité - Universitätsmedizin BerlinORCID 0009-0003-2868-8716Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetics· 2 Bioengineering· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Approach:experimental assay· 3 Organism:human· 3 Assay:bulk RNA-seq· 2 Assay:ChIP-seq· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:mouse· 2

Frequent Co-Authors

Daniel M. IbrahimiD· 3 shared Mai H.Q. Phan· 2 shared Andreas F. ThünemanniD· 1 shared Andreas MaggiD· 1 shared Arnaud Regis KrebsiD· 1 shared Bai-Wei LoiD· 1 shared Boris LenhardiD· 1 shared Christopher L. SansamiD· 1 shared

Activity by Year

2025-2025 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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3 shared papersGenetics

Daniel M. IbrahimORCID

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4 papers

Recent·Most cited

GeneticsbioRxivPreprintOct 14, 2025

Promoter-responsiveness to distal regulatory elements is mediated by the promoter-proximal region

Blanka Majchrzycka, Stefan Mundlos, Arnaud Regis Krebs, Daniel M. Ibrahim

The paper shows that the promoter-proximal region is necessary for cell-type specific promoter responsiveness to distal enhancers in mouse embryonic stem cells and neural progenitor cells.

2 citations

mousebulk RNA-seq

𝕏 PostBluesky

BioengineeringbioRxivPreprintSep 7, 2025

Osmotic niche changes as multifaceted trigger of cellular regenerative processes in organ injury

Matthias R. Kollert, Taimoor H. Qazi, Mai H.Q. Phan…·Georg N. Duda

This study shows that osmolality changes in bone marrow after fracture enhance mesenchymal stromal cell regeneration by altering ECM viscoelasticity and chromatin structure.

DOI 10.1101/2025.09.07.674644

humanbulk RNA-seq

𝕏 PostBluesky

GenomicsGenome biologyPeer-reviewedJul 7, 2025

Cell Cycle-Dependent TICRR/TRESLIN and MTBP Chromatin Binding Mechanisms and Patterns

Tyler D. Noble, Courtney G. Sansam, Kimberlie A. Wittig…·Christopher L. Sansam

The paper investigates TICRR/TRESLIN and MTBP chromatin binding in human cells, showing G1-specific dependency on TRESLIN and independence from licensed origins.

8 citations

humanChIP-seq

𝕏 PostBluesky

GeneticsNature GeneticsPeer-reviewedMay 27, 2025

Conservation of Regulatory Elements with Highly Diverged Sequences Across Large Evolutionary Distances

Mai H.Q. Phan, Tobias Zehnder, Fiona Puntieri…·Daniel M. Ibrahim

The paper identifies functionally conserved regulatory elements across distantly related vertebrates despite sequence divergence using a synteny-based method.

36 citationstop 1%

mousehuman

𝕏 PostBluesky