Author

Jireh R. A. Agda

Centre for Biodiversity GenomicsORCID 0009-0004-5235-9610Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Approach:benchmark study· 1 Organism:C. elegans· 1 Organism:Drosophila· 1 Approach:experimental assay· 1 Assay:imaging· 1 Organism:non-human primate· 1 Organism:plant (other)· 1

Frequent Co-Authors

A Sanchez· 1 shared Adam J. Hellinga· 1 shared Candice N. HirschiD· 1 shared Carlos Santiago Blanco Lugo· 1 shared Catherine WeiiD· 1 shared Corey FengiD· 1 shared D ChaniD· 1 shared Dirk SteinkeiD· 1 shared

Activity by Year

2019-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

A Sanchez

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2 papers

Recent·Most cited

BioinformaticsDataPeer-reviewedOct 25, 2024

Towards a Taxonomy Machine. A Training Set of 5.6 Million Arthropod Images

Dirk Steinke, Sujeevan Ratnasingham, Jireh R. A. Agda…·Paul D. N. Hebert

This paper releases a dataset of 5.6 million arthropod images for training machine learning models in taxonomic identification.

7 citations

DrosophilaC. elegans

𝕏 PostBluesky

GenomicsGenome biologyPeer-reviewedDec 16, 2019

Benchmarking Transposable Element Annotation Methods for Creation of a Streamlined, Comprehensive Pipeline

Shujun Ou, Weija Su, Yi Liao…·Matthew B. Hufford

The paper benchmarks TE annotation methods and develops a pipeline called EDTA to create a comprehensive, condensed TE library for both intact and fragmented elements in rice genomes.

1,450 citationstop 1%

plant (other)whole-genome sequencing

𝕏 PostBluesky