Author

Jonas Nykamp

University of California, Santa CruzORCID 0009-0008-5182-1761Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Cell Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:Drosophila· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Alexandra LumiD· 2 shared Jodie JacobsiD· 2 shared Shelbi L. RusselliD· 2 shared Cade MirchandaniiD· 1 shared Cayla R. M. LagousisiD· 1 shared Merly EscalonaiD· 1 shared Richard Edward GreeniD· 1 shared Samuel SaccoiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 31 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersGenomics

Alexandra LumORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

GenomicsbioRxivPreprintAug 4, 2026

Single-cell transcriptomics reveals a multiphasic Wolbachia host infection trajectory

Jodie Jacobs, Alexandra Lum, Jonas Nykamp…·Shelbi L. Russell

This study uses single-cell RNA sequencing to reveal how Wolbachia infection progresses through distinct transcriptional phases in Drosophila cells.

DOI 10.64898/2026.07.29.741357

DrosophilascRNA-seq

𝕏 PostBluesky

Cell BiologybioRxivPreprintJun 5, 2025

Wolbachia infection induces host cell state changes in vitro and determines symbiotic fate in Drosophila

Jodie Jacobs, Jonas Nykamp, Alexandra Lum…·Shelbi L. Russell

This study shows Wolbachia infection changes host cell states in Drosophila cell lines, affecting gene expression and chromatin structure, and suggests these changes determine symbiotic outcomes.

1 citation

Drosophilabulk RNA-seq

𝕏 PostBluesky