Author

Emily R. Cliff

University of WashingtonORCID 0009-0009-4796-4177Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Research Focus:perturbation response prediction· 1 Assay:scRNA-seq· 1 Organism:yeast· 1

Frequent Co-Authors

Jesse G. ZalataniD· 2 shared Alberto RomanoiD· 1 shared Alessandro BerteroiD· 1 shared Brianna Fernandez· 1 shared Daniel Cunningham‐BryantiD· 1 shared Davide CacchiarelliiD· 1 shared Elisa BalmasiD· 1 shared Federica SozzaiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersSynthetic Biology

Jesse G. ZalatanORCID

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2 papers

Recent·Most cited

Synthetic BiologybioRxivPreprintJun 1, 2026

Combinatorial and Inducible CRISPRa/i Enables Canalized hiPSC Forward Programming and Iterative Refinement via Single-Cell Genomics

Federica Sozza, Alberto Romano, Nicole D'Elia…·Alessandro Bertero

The paper introduces CIRI, a CRISPR-based platform for programmable cell fate conversion in hiPSCs, using single-cell genomics to identify regulatory factors for myogenic differentiation.

DOI 10.64898/2026.05.31.729073

humanscRNA-seq

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Synthetic BiologyACS Synthetic BiologyPeer-reviewedNov 1, 2021

CRISPR-Cas-mediated tethering recruits the yeast HMR mating-type locus to the nuclear periphery but fails to silence gene expression

Emily R. Cliff, Robin L. Kirkpatrick, Daniel Cunningham‐Bryant…·Jesse G. Zalatan

This study shows that CRISPR-Cas-mediated tethering recruits the yeast HMR locus to the nuclear periphery but does not silence gene expression, unlike a Gal4-mediated system.

DOI 10.1021/acssynbio.1c00306

yeastexperimental assay

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