bioRxivNeurosciencePreprint
Context-dependent hyperactivity in syngap1a and syngap1b zebrafish autism models.
Sureni H. SumathipalaiD, Suha Khan, Robert A. KozoliD, Yoichi ArakiiD, Sheyum SyediD, Richard L. HuganiriD, Julia E. DallmaniD
- Citations
- 2
Abstract
Background and AimsSYNGAP1 disorder is a prevalent genetic form of Autism Spectrum Disorder and Intellectual Disability (ASD/ID) and is caused by de novo or inherited mutations in one copy of the SYNGAP1 gene. In addition to ASD/ID, SYNGAP1 disorder is associated with comorbid symptoms including treatment-resistant-epilepsy, sleep disturbances, and gastrointestinal distress. Mechanistic links between these diverse symptoms and SYNGAP1 variants remain obscure, therefore, our goal was to generate a zebrafish model in which this range of symptoms can be studied. MethodsWe used CRISPR/Cas9 to introduce frameshift mutations in the syngap1a and syngap1b zebrafish duplicates (syngap1ab) and validated these stable models for Syngap1 loss-of-function. Because SYNGAP1 is extensively spliced, we mapped splice variants to the two zebrafish syngap1a and b genes and identified mammalian-like isoforms. We then quantified locomotory behaviors in zebrafish syngap1ab larvae under three conditions that normally evoke different arousal states in wild type larvae: aversive, high-arousal acoustic, medium-arousal dark, and low-arousal light stimuli. ResultsWe show that CRISPR/Cas9 indels in zebrafish syngap1a and syngap1b produced loss-of-function alleles at RNA and protein levels. Our analyses of zebrafish Syngap1 isoforms showed that, as in mammals, zebrafish Syngap1 N- and C-termini are extensively spliced. We identified a zebrafish syngap1 1-like variant that maps exclusively to the syngap1b gene. Quantifying locomotor behaviors showed that syngap1ab larvae are hyperactive compared to wild type but to differing degrees depending on the stimulus. Hyperactivity was most pronounced in low arousal settings, with overall movement increasing with the number of mutant syngap1 alleles. ConclusionsOur data support mutations in zebrafish syngap1ab as causal for hyperactivity associated with elevated arousal that is especially pronounced in low-arousal environments.
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Mouse models of SYNGAP1-related intellectual disability
Yoichi Araki, Elizabeth E. Gerber, … Richard L. Huganir·Proceedings of the National Academy of SciencesPeer-reviewed·Sep 5, 2023
- Hyperexcitability and translational phenotypes in a preclinical model of SYNGAP1 mutations
Timothy A. Fenton, Olivia Y Haouchine, … Jill L. Silverman·bioRxiv·Jul 24, 2023
- Heterozygous deletion of SYNGAP enzymatic domains in rats causes selective learning, social and seizure phenotypes
Danai Katsanevaki, SM Till, … Peter C. Kind·bioRxiv·Oct 14, 2020
- Assessment of autism zebrafish mutant models using a high-throughput larval phenotyping platform
Alexandra Colón-Rodríguez, José M. Uribe‐Salazar, … Megan Y. Dennis·Frontiers in Cell and Developmental BiologyPeer-reviewed·Nov 23, 2020
- Seizure-like behavior and hyperactivity in napb knockout zebrafish as a model for autism and epilepsy
Kyung Chul Shin, Waseem Hasan, … Yongsoo Park·Scientific ReportsPeer-reviewed·Apr 29, 2025
- Translatable electrophysiological and behavioral abnormalities in a humanized model of SYNGAP1-disorder
Alex J. Félix, Brandon L. Brown, … Benjamin L. Prosser·Molecular PsychiatryPeer-reviewed·Jul 14, 2026