bioRxivBioengineering
A low-cost, open-source evolutionary bioreactor and its educational use
V. Gopalakrishnan, D. Crozier, K. Card, L. Chick, N. P. Krishnan, E. McClure, J. Pelesko, D. F. K. Williamson, D. Nichol, S. Mandal, R. A. Bonomo, J. G. Scott
Abstract
The morbidostat automatically adjusts antibiotic concentration as a bacterial population evolves resistance. Although this device has advanced our understanding of the evolutionary and ecological processes that drive antibiotic resistance, no low-cost and open-source systems are available for educators. Here, we present the EVolutionary biorEactor (EVE), an accessible alternative to other morbidostats for use in low-resource classrooms that requires minimal engineering and programming experience. We first compare our system to others, emphasizing how it differs in design and cost. We then describe how we validated the EVE by evolving replicate Escherichia coli populations under chloramphenicol challenge and comparing our results to those in the published literature. Lastly, we detail how high school students used the EVE to learn about bacterial growth and antibiotic resistance.
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- OpenEvo: An Open-Source Platform for Automated Evolution and Analysis
Sebastian S. Cocioba Sebastian S. Cocioba, Pin-Che Huang, … Phillip Kyriakakis·bioRxiv·Sep 30, 2026
- yEvo: a modular eukaryotic genetics and evolution research experience for high school students
B. Taylor, A. R. Warwick, … M. J. Dunham·bioRxiv·May 26, 2022
- EvolvingSTEM: A microbial evolution-in-action curriculum that enhances learning of evolutionary biology and biotechnology
V. S. Cooper, T. M. Warren, … S. Scarponi·bioRxiv·Mar 23, 2019
- Exploiting epistasis to perturb the evolution of antibiotic resistance
M. Lukacisinova, B. Fernando, T. Bollenbach·bioRxiv·Aug 16, 2019
- Drug mode of action and resource constraints modulate antimicrobial resistance evolution
O. Delaney, A. D. Letten, J. Engelstädter·bioRxiv·Aug 29, 2023
- High-throughput laboratory evolution and evolutionary constraints in Escherichia coli
T. Maeda, J. Iwasawa, … C. Furusawa·bioRxiv·Feb 19, 2020