bioRxivCancer BiologyPreprint
SOX9 binds TCFs to mediate Wnt/β catenin target gene activation
Abstract
Activation of the Wnt/{beta}-catenin pathway regulates gene expression by promoting the formation of a {beta}-catenin-TCF complex on target gene chromatin. The transcription factor SOX9 antagonises Wnt signalling in many contexts through its ability to down-regulate {beta}-catenin protein levels. Here, we find that SOX9 promotes the proliferation of Wnt-driven colorectal cancer (CRC) cells. We identify multiple enhancers activated by SOX9 working in concert with the Wnt pathway. These enhancers are co-occupied by TCFs and SOX9 and contain TCF and SOX9 binding sites that are necessary for transcriptional activation. In addition, we identify a physical interaction between the DNA-binding domains of TCFs and SOX9 and show that TCF-SOX9 interactions are important for target gene regulation and CRC cell growth. Our work demonstrates a highly context-dependent effect of SOX9 on Wnt targets, with activation or repression being dependent on the presence or absence of SOX9 binding sites on Wnt-regulated enhancers respectively.
- organism: human
- assay: ChIP-seq
- assay: DNA methylation
- research focus: chromatin & epigenetic regulation
- research focus: cancer & tumor microenvironment
- research focus: gene regulatory network inference
- approach: experimental assay
- approach: statistical model
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- SOX transcription factors direct TCF-independent WNT/beta-catenin transcription.
Shreyasi Mukherjee, David M. Luedeke, … Aaron M. Zorn·bioRxiv·Aug 25, 2021
- TBX3 acts as tissue-specific component of the Wnt/β-catenin enhanceosome
Dario Zimmerli, Costanza Borrelli, … Claudio Cantù·eLifePeer-reviewed·Aug 18, 2020
- β-catenin interacts with the TAZ1 and TAZ2 domains of CBP/p300 to activate gene transcription
C. Cranstone, A. D. Brown, … D. N. Langelaan·bioRxiv·Aug 30, 2022
- The Developmental Transcription Factor TBX3 Physically Engages with the Wnt/β-catenin Transcriptional Complex in Human Colorectal Cancer Cells to Regulate Metastasis Genes
Amaia Jauregi‐Miguel, Simon Söderholm, … Claudio Cantù·bioRxiv·Dec 18, 2023
- The oncogene FOXQ1 is a selective activator of Wnt/β-catenin signalling
Giulia Pizzolato, Lavanya Moparthi, … Stefan Koch·bioRxiv·Jan 17, 2022
- SIRT1 mediates the antagonism of Wnt/β-catenin pathway by vitamin D in colon carcinoma cells.
J. M. Garcia-Martinez, A. Chocarro-Calvo, … C. Garcia-Jimenez·bioRxiv·Jan 21, 2024