Author
Claudio Cantù
Linköping UniversityORCID 0000-0003-1547-5415Unclaimed ORCID profile · follow to get notified of new preprints
Biology Disciplines
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2018-2026 · peak 4/yrCo-Author Collaboration Network
10 top collaborators · 41 mutual co-author links18 papers
Recent·Most cited
- Developmental BiologybioRxivPreprint
GATA transcription factors act as gatekeepers between the Wnt/β-catenin-mediated proliferation and differentiation in the intestinal epithelium
Yorick Bernardus Cornelis van de Grift, Tamina Weiss, Guiliano Castellano…·Claudio Cantù
The paper shows GATA transcription factors modulate Wnt/β-catenin signaling to control cell identity in the intestinal epithelium by repressing secretory lineage genes in stem cells.
DOI 10.64898/2026.04.22.719835 - Molecular BiologybioRxivPreprint
CUT&ID for simultaneous profiling of protein-DNA and protein-protein interactions
This paper introduces CUT&ID, a method that simultaneously profiles protein-DNA and protein-protein interactions without requiring transgenesis.
DOI 10.64898/2025.12.11.693662 - Cancer BiologybioRxiv
Differential Wnt/β-Catenin Signaling via TCF7L2/LEF1 Binding Specificity Shapes Cellular and Tumor Phenotypes
Thomas A. Kluiver, Anna Nordin, Yuyan Lu…·Weng Chuan Peng
The paper identifies how differential TCF7L2/LEF1 binding specificity of {beta}-catenin shapes distinct gene regulatory outcomes in liver tumors.
- GenomicsbioRxivPreprint
Mechanistic dissection of GRHL2 and PR transcriptional co-regulation in breast cells
Marleen T. Aarts, Anna Nordin, Claudio Cantù…·Renée van Amerongen
This study identifies GRHL2 as a co-regulator of PR in breast cancer cells, showing their interaction and shared regulation of gene enhancers through chromatin looping.
DOI 10.1101/2025.09.01.673508 - Developmental BiologyBiology OpenPeer-reviewed
SOX2 and NR2F1 coordinate the gene expression program of the early postnatal visual thalamus
Linda Serra, Anna Nordin, Mattias Enar Jonasson…·Sara Mercurio
The paper identifies SOX2 and NR2F1 as regulators of gene expression in the early postnatal visual thalamus, showing their shared target genes and regulatory mechanisms.
2 citations - GenomicsbioRxivPreprint
The Transcription Factor Binding Landscape of Mouse Development
Anna Nordin, Gianluca Zambanini, Mattias Enar Jonasson…·Claudio Cantù
The paper maps transcription factor binding across mouse tissues at different developmental stages, revealing tissue-specific activity and conserved regulatory regions with functional relevance in humans.
- Developmental BiologybioRxivPreprint
Wnt signaling alters CTCF binding patterns and global chromatin structure
Anna Nordin, Chaitali Chakraborty, Mattias Enar Jonasson…·Claudio Cantù
This study shows that Wnt signaling changes CTCF binding and chromatin structure by creating new CTCF binding sites that depend on β-catenin.
- Developmental BiologybioRxivPreprint
The Developmental Transcription Factor TBX3 Physically Engages with the Wnt/β-catenin Transcriptional Complex in Human Colorectal Cancer Cells to Regulate Metastasis Genes
Amaia Jauregi‐Miguel, Simon Söderholm, Tamina Weiss…·Claudio Cantù
This study identifies TBX3 as a functional component of the Wnt/β-catenin complex in human colorectal cancer, showing it modulates metastasis-related transcription through direct protein interactions.
3 citations - GenomicsbioRxivPreprint
Exhaustive identification of genome-wide binding events of transcriptional regulators with ICEBERG
Anna Nordin, Pierfrancesco Pagella, Gianluca Zambanini, Claudio Cantù
ICEBERG identifies genome-wide binding events of transcriptional regulators by using extensive CUT&RUN replicates, revealing previously undetectable events in colorectal cancer.
- Developmental BiologybioRxivPreprint
Single-cell response to Wnt activation in human embryonic stem cells reveals uncoupling of Wnt target gene expression
Simon Söderholm, Amaia Jauregi‐Miguel, Pierfrancesco Pagella…·Claudio Cantù
The paper examines single-cell Wnt signaling responses in human embryonic stem cells and finds that Wnt target gene activation varies among cells, showing uncoupling in gene expression patterns.
- GenomicsbioRxivPreprint
The CUT&RUN Blacklist of Problematic Regions of the Genome
Anna Nordin, Gianluca Zambanini, Pierfrancesco Pagella, Claudio Cantù
The paper identifies CUT&RUN-specific problematic genomic regions, called blacklists, which persist despite standard quality control measures and improve peak calling reliability when removed.
- GenomicsbioRxivPreprint
Time-resolved analysis of Wnt-signaling reveals β-catenin temporal genomic repositioning and cell type-specific plastic or elastic chromatin responses
Pierfrancesco Pagella, Simon Söderholm, Anna Nordin…·Claudio Cantù
The paper shows that β-catenin binds different genomic loci over time, leading to cell-type specific chromatin responses termed plastic or elastic during Wnt signaling.
- Developmental BiologybioRxivPreprint
A New CUT&RUN Low Volume-Urea (LoV-U) protocol uncovers Wnt/β-catenin tissue-specific genomic targets
Gianluca Zambanini, Anna Nordin, Mattias Enar Jonasson…·Claudio Cantù
The paper introduces a modified CUT&RUN protocol, LoV-U, to reliably profile β-catenin binding and identifies its tissue-specific target genes in human and mouse cells.
- Molecular BiologybioRxivPreprint
The oncogene FOXQ1 is a selective activator of Wnt/β-catenin signalling
Giulia Pizzolato, Lavanya Moparthi, Simon Söderholm…·Stefan Koch
This study identifies FOXQ1 as a bimodal activator of Wnt/β-catenin signalling, functioning through TCF/LEF factors and independent mechanisms.
DOI 10.1101/2022.01.17.476620 - GeneticsStem CellsPeer-reviewed
Sox2 controls neural stem cell self-renewal through a Fos-centered gene regulatory network
Miriam Pagin, Mattias Pernebrink, Simone Giubbolini…·Silvia K. Nicolis
This study identifies Fos as a key regulator of neural stem cell self-renewal, showing it rescues proliferation and interacts with Sox2 through a gene regulatory network involving Socs3.
66 citationstop 5% - Developmental BiologyeLifePeer-reviewed
TBX3 acts as tissue-specific component of the Wnt/β-catenin enhanceosome
Dario Zimmerli, Costanza Borrelli, Amaia Jauregi‐Miguel…·Claudio Cantù
The paper identifies TBX3 as a tissue-specific component of the Wnt/β-catenin enhanceosome, showing its role in transcriptional regulation and metastasis in colorectal cancer.
- GeneticsGenes & DevelopmentPeer-reviewed
Mutations in Bcl9 and Pygo genes cause congenital heart defects by tissue-specific perturbation of Wnt/β-catenin signaling
Claudio Cantù, Anastasia Felker, Dario Zimmerli…·Christian Mosimann