The nonsense-mediated decay RNA-surveillance pathway facilitates the hypoxia response by C. elegans
Abstract
Hypoxia (low O2) induces physiological, metabolic and behavioral changes. The major hypoxia response pathway is conserved from nematodes to mammals and is driven by activation of the HIF (hypoxia inducible factor) family of transcription factors. Despite a fundamental role of the HIF pathway in regulating cellular homeostasis in response to hypoxic stress, interactions between the HIF pathway and cellular quality-control pathways are largely unknown. Using an unbiased genetic screen, we discovered that in C. elegans nonsense-mediated decay (NMD), an evolutionarily conserved mechanism of RNA surveillance, acts in parallel to HIF-1 to selectively enhance specific aspects of the response to HIF-1 activation, possibly through co-regulation of a distinct subset of HIF-1-upregulated genes. Our findings reveal a functional integration between oxygen sensing and RNA surveillance and establish NMD as a key regulator of specific aspects of the HIF-1-driven transcriptional program and physiological response.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 0
- FWCI
- 0.00
- Field percentile
- 25th percentile
- Organism
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Crosstalk in oxygen homeostasis networks: SKN-1/NRF inhibits the HIF-1 hypoxia-inducible factor in Caenorhabditis elegans
Dingxia Feng, Zhiwei Zhai, … Jo Anne Powell‐Coffman·PLoS ONEPeer-reviewed·Jul 9, 2021
- Nuclear Hormone Receptor NHR-49 controls a HIF-1-independent hypoxia adaptation pathway in Caenorhabditis elegans
Kelsie R. S. Doering, Xuanjin Cheng, … Stefan Taubert·eLifePeer-reviewed·Mar 14, 2022
- Transcriptome analyses describe the consequences of persistent HIF-1 over-activation in Caenorhabditis elegans
Dingxia Feng, Long Qu, Jo Anne Powell‐Coffman·PLoS ONEPeer-reviewed·Mar 22, 2024
- Whole genome profiling of short-term hypoxia induced genes and identification of HIF-1 binding sites provide insights into HIF-1 function in Caenorhabditis elegans
Dingxia Feng, Long Qu, Jo Anne Powell‐Coffman·PLoS ONEPeer-reviewed·May 14, 2024
- Hypoxic response regulators RHY-1 and EGL-9/PHD promote longevity through a VHL-1 independent transcriptional response.
Joseph C.P. Kruempel, Hillary A. Miller, … Scott F. Leiser·GeroSciencePeer-reviewed·May 12, 2020
- HIR-1 Mediates Response to Hypoxia-Induced Extracellular Matrix Remodeling
Roman Vozdek, Yong Long, Dengke K. Ma·bioRxiv·Apr 16, 2018