bioRxivCancer Biology
RB1 loss triggers dependence on ESRRG in retinoblastoma
M. G. Field, J. N. Kuznetsoff, M. Zhang, J. J. Dollar, M. A. Durante, , Y. Sayegh, C. Decatur, S. Kurtenbach, D. Pelaez, J. W. Harbour
Abstract
Retinoblastoma (Rb) is a deadly childhood eye cancer that is classically initiated by inactivation of the RB1 tumor suppressor. Clinical management continues to rely on nonspecific chemotherapeutic agents that are associated with treatment resistance and toxicity. Here, we analyzed 103 whole exomes, 16 whole transcriptomes, 5 single-cell transcriptomes, and 4 whole genomes from primary Rb tumors to identify novel Rb dependencies. Several recurrent genomic aberrations implicate estrogen-related receptor gamma (ESRRG) in Rb pathogenesis. RB1 directly interacts with and inhibits ESRRG, and RB1 loss uncouples ESRRG from negative regulation. ESRRG regulates genes involved in retinogenesis and oxygen metabolism in Rb cells. ESRRG is preferentially expressed in hypoxic Rb cells in vivo. Depletion or inhibition of ESRRG causes marked Rb cell death which is exacerbated in hypoxia. These findings reveal a novel dependency of Rb cells on ESRRG, and they implicate ESRRG as a potential therapeutic vulnerability in Rb.
- organism: human
- assay: whole-exome sequencing
- assay: whole-genome sequencing
- research focus: gene regulatory network inference
- research focus: differential expression
- research focus: drug response / drug discovery
- approach: experimental assay
- approach: statistical model
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Longitudinal analysis of retinal cell state transitions in RB1-deficient retinal organoids reveals the nascent cone precursors are the earliest cell-origin of human retinoblastoma
Ke Ye, Yuan Wang, … Xiufeng Zhong·Cell Death and DiseasePeer-reviewed·Jan 14, 2026
- Developmental-stage-specific proliferation and retinoblastoma genesis in RB-deficient human but not mouse cone precursors
H. P. Singh, S. Wang, … D. Cobrinik·bioRxiv·Jun 26, 2018
- The G1/S transition is promoted by Rb degradation via the E3 ligase UBR5
S. Zhang, L. F. Valenzuela, … J. Skotheim·bioRxiv·Oct 3, 2023
- Integrated Epigenetic and Transcriptomic Profiling Reveals Dynamic Regulatory Networks Driving Retinoblastoma Pathogenesis
- Therapeutic vulnerability to PARP1/2 inhibition in RB1-mutant osteosarcoma
G. Zoumpoulidou, C. A. Mendoza, … S. Mittnacht·bioRxiv·Dec 28, 2020
- RBL1 (p107) functions as tumor suppressor in glioblastoma and small-cell pancreatic neuroendocrine carcinoma
T. Naert, D. Dimitrakopoulou, … K. Vleminckx·bioRxiv·Jan 23, 2019