bioRxivBiochemistry
Molecular basis for allosteric regulation of the type 2 ryanodine receptor channel gating by key modulators
X. Chi, D. Gong, K. Ren, G. Zhou, G. Huang, J. Lei, Q. Zhou, N. Yan
Abstract
The type-2 ryanodine receptor (RyR2) is responsible for releasing Ca2+ from the sarcoplasmic reticulum of cardiomyocytes, subsequently leading to muscle contraction. Here, we report four cryo-EM structures of porcine RyR2 bound to distinct modulators that collectively provide mechanistic insight into RyR2 regulation. Ca2+ alone induces a contraction of the Central domain that facilitates the dilation of S6 bundle, but is insufficient to open the pore. The small molecule agonist PCB95 helps Ca2+ to overcome the barrier for opening. FKBP12.6 induces a relaxation of the Central domain that decouples it from the S6 bundle, stabilizing RyR2 in a closed state. Caffeine locks the Central domain in a constitutively contracted state, while further addition of ATP opens the channel by strengthening the coupling between the U-motif and S6. Our study marks an important step towards mechanistic understanding of the complicated regulation of this key channel whose aberrant activity engenders life-threatening cardiac disorders.
- assay: cryo-EM
- research focus: chromatin & epigenetic regulation
- research focus: protein structure prediction
- research focus: host-pathogen & immune response
- approach: experimental assay
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Structural basis for Ca2+-dependent allosteric modulation of cardiac ryanodine receptor by Ryanozole
Yuya Otori, Takashi Murayama, … Haruo Ogawa·bioRxiv·May 23, 2026
- Molecular basis for gating of cardiac ryanodine receptor: underlying mechanisms for gain- and loss-of function mutations
T. Kobayashi, A. Tsutsumi, … H. Ogawa·bioRxiv·Nov 30, 2020
- Structure-based mechanism of RyR channel operation by calcium and magnesium ions
Alexandra Zahradnı́ková, Jana Pavelková, … Ivan Zahradnı́k·PLoS Computational BiologyPeer-reviewed·Apr 29, 2025
- Interplay between Mg2+ and Ca2+ at multiple sites of the ryanodine receptor
M. Samso, A. R. Nayak, … P. Sompornpisut·bioRxiv·Feb 16, 2024
- Mapping Co-regulation Pathways among Ligand Binding sites in RyR1
V. R. Chirasani, K. I. Popov, … N. V. Dokholyan·bioRxiv·Jun 19, 2019
- Recruiting RyRs to open in a Ca2+ release unit: Single-RyR gating properties make RyR group dynamics
D. Gillespie·bioRxiv·Oct 29, 2019