Laboratory surrogate markers of residual HIV replication among distinct groups of individuals under antiretroviral therapy
R. S. Diaz, L. B. Giron, S. B. Tenore, L. Janini, M. C. Sucupira
Abstract
BackgroundResidual HIV-1 replication among individuals under antiretroviral therapy (ART) relates to HIV micro-inflammation.\n\nObjectivesTo determine levels of residual HIV replication markers among distinct subgroups of antiretroviral-treated individuals.\n\nMethods116 patients were distributed into 5 treatment groups: first-line suppressive ART with non-nucleoside reverse-transcriptase inhibitor (NNRTI) (n=26), first-line suppressive ART with boosted protease inhibitors (PI-r) (n=25), salvage therapy using PI-r (n=27), salvage therapy with PI-r and raltegravir (n=22) and virologic failure (n=16). Episomal and total DNA quantitation was evaluated. ELISA was used for HIV antibody and LPS quantitation.\n\nResultsEpisomal DNA was positive in 26% to 38% of individuals under suppressive ART, being higher among individuals experiencing virologic failure (p=0.04). HIV proviral load was higher among patients with detectable episomal DNA (p=0.01). Individuals receiving initial PI-r treatment presented lower HIV antibodies (p=0.027) and LPS (p=0.029) than individuals receiving NNRTI. There was a negative correlation between episomal DNA quantitation and suppressive ART duration (p=0.04), CD4+ T-cell count (p=0.08), and CD8+ T-cell count (p=0.07).\n\nConclusionsResidual HIV replication has been inferred among individuals under suppressive ART according to episomal DNA detection. Residual replication may decrease with longer periods of suppressive ART and higher levels of CD4+ and CD8+ T cells. The relationship between episomal DNA and total DNA suggests a replenishment of the proviral reservoir with impacts on HIV persistence. Lower antibody and LPS levels among patients with initial PI-r ART suggest these regimens may more effectively suppress HIV with higher capacity to decrease the HIV antigenic component.
02 /Specification & Classification
Click any tag to browse matching papers- Organism
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Establishment and stability of the latent HIV-1 DNA reservoir
Johanna Brodin, Fabio Zanini, … Jan Albert·bioRxiv·May 23, 2016
- A majority of HIV persistence during antiretroviral therapy is due to infected cell proliferation
D. B. Reeves, E. R. Duke, … J. T. Schiffer·bioRxiv·Sep 7, 2018
- Re-Evaluating Evolution In The HIV Reservoir
D. I. S. Rosenbloom, A. L. Hill, … R. F. Siliciano·bioRxiv·May 22, 2017
- A New Type of Nonsuppressible Viremia Produced by HIV-Infected Macrophage
Matthew Moeser, Nathan Long, … Sarah Joseph·The Journal of Infectious DiseasesPeer-reviewed·Apr 16, 2026
- HIV-1 Rebound Virus Consists of a Small Number of Lineages That Entered the Reservoir Close to ART Initiation
Lynn Tyers, Matthew Moeser, … Sarah Joseph·bioRxiv·Jan 29, 2025
- Proviruses in CD4+ T cells reactive to autologous antigens contribute to nonsuppressible HIV-1 viremia
Fengting Wu, Milica Moskovljevic, … Francesco Roberto Simonetti·Science Translational MedicinePeer-reviewed·Aug 13, 2025