bioRxivBioinformaticsPreprint
MASST: A Web-based Basic Mass Spectrometry Search Tool for Molecules to Search Public Data.
Mingxun WangiD, Alan K. JarmuschiD, Fernando VargasiD, Alexander A. AksenoviD, Julia M. GauglitziD, Kelly C. WeldoniD, Daniel PetrasiD, Ricardo SilvaiD, Robby Quinn, Alexey V. MelnikiD, Justin J. J. van der HooftiD, Andrés Mauricio Caraballo‐RodrígueziD, Louis-Félix Nothias-ScagliaiD, Christine M. AcevesiD, Morgan W. PanitchpakdiiD, Elizabeth BrowniD, Francesca Di Ottavio, Nicole C. SikoraiD, Emmanuel O. Elijah, Lara Labarta-BajoiD, Emily C. GentryiD, Shabnam ShalapouriD, Kathleen E. KyleiD, Sara P. PuckettiD, Jeramie D. WatrousiD, , Pieter C. DorresteiniD
Abstract
CorrespondenceWe introduce a web-enabled small-molecule mass spectrometry (MS) search engine. To date, no tool can query all the public small-molecule tandem MS data in metabolomics repositories, greatly limiting the utility of these resources in clinical, environmental and natural product applications. Therefore, we introduce a Mass Spectrometry Search Tool (MASST) (https://proteosafe-extensions.ucsd.edu/masst/), that enables the discovery of molecular relationships among accessible public metabolomics and natural product tandem mass spectrometry data (MS/MS).
- assay: metagenomics
- assay: metabolomics
- research focus: database / resource
- approach: experimental assay
- Citations
- 14
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