Human Tear Metabolomics Using Liquid Chromatography-Q Exactive-HF Mass Spectrometry
Gauri Shankar ShresthaiD, Ajay Kumar VijayiD, Fiona Jane StapletoniD, Russell PickfordiD, Nicole Ann CarntiD
Abstract
AimTo putatively identify and characterise human tear metabolites in a normal subject on an untargeted platform of liquid chromatography-Q exactive-HF mass spectrometry. MethodsFour samples of unstimulated tears were collected from both eyes on four consecutive days between 1 - 2 pm using a microcapillary tube and pooled from both eyes each day. Untargeted analysis of the tears was performed by chromatographic separation of constituent metabolites in both CSH-C18RP (Charged Surface Hybrid-C18 Reversed Phase) and SeQuant ZIC-pHILIC (Zwitterionic-polymeric Hydrophilic Interaction Liquid Chromatography) columns, followed by heated electrospray ionization (HESI) and the acquisition of mass spectra using QExactive-HF mass spectrometer. Compound Discoverer software (v2.0) was used for data analysis. ResultEighty-two metabolites were tentatively identified. Seventy compounds (85.4 %) were observed in all four samples with a coefficient of variation (CV) less than 25 %. Fifty-nine metabolites (71.9 %) were novel in the healthy tears. Amino acids were the most frequently detected metabolites in the tears (28 %), followed by carbohydrates (12.2 %), carboxylic acids (8.5 %), carnitines (6.1 %) and glycerophospholipids (4.9 %), respectively. ConclusionThe current untargeted platform is capable of detecting a range of tear metabolites across several biological categories. This study provides a baseline for further ocular surface studies.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 0
- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Comprehensive Metabolomic Analysis of Human Heart Tissue Enabled by Parallel Metabolite Extraction and High-Resolution Mass Spectrometry
Benjamin Wancewicz, Melissa R. Pergande, … Ying Ge·Analytical ChemistryPeer-reviewed·Apr 3, 2024
- Public LC-Orbitrap-MS/MS Spectral Library for Metabolite Identification
P. Phapale, A. Palmer, … T. Alexandrov·bioRxiv·Nov 21, 2020
- Quantitative evaluation of a high resolution lipidomics platform
J. Liu, X. Liu, … J. W. Locasale·bioRxiv·May 4, 2019
- Offline Two-dimensional Liquid Chromatography-Mass Spectrometry for Deep Annotation of the Fecal Metabolome
Brady G. Anderson, Alexander B. Raskind, … Charles R. Evans·bioRxiv·May 31, 2023
- Meta-analysis of targeted metabolomics data from heterogeneous biological samples provides insights into metabolite dynamics
Ho‐Joon Lee, Daniel M. Kremer, … Costas Andreas Lyssiotis·MetabolomicsPeer-reviewed·Jul 1, 2019
- Quantitative profiling of 1-Carbon Metabolites, Amino Acids and Precursors, and Plasmalogens in human plasma using Ultra-High-Pressure Liquid Chromatography coupled with Tandem Mass Spectrometry and robotic compound extraction
S. Andraos, M. Goy, … J. M. O'Sullivan·bioRxiv·Aug 17, 2019