bioRxivPlant Biology
Differential requirement of MED14 and UVH6 for heterochromatin transcription upon destabilization of silencing
P. Bourguet, S. de Bossoreille, L. Lopez-Gonzalez, M.-N. Pouch-Pelissier, A. Gomez-Zambrano, A. Devert, T. Pelissier, R. Pogorelcnik, I. Vaillant, O. Mathieu
Abstract
Constitutive heterochromatin is commonly associated with high levels of repressive epigenetic marks and is stably maintained transcriptionally silent by the concerted action of different, yet convergent, silencing pathways. Reactivation of heterochromatin transcription is generally associated with alterations in levels of these epigenetic marks. However, in mutants for particular epigenetic regulators, or upon particular environmental changes such as heat stress, heterochromatin-associated silencing is destabilized without noticeable changes in epigenetic marks. This suggests that transcription can occur in a non-permissive chromatin context, yet the factors involved remain poorly known. Here, we show that heat stress-induced transcription of heterochromatin depends on the TFIIH component UVH6 and the Mediator subunit MED14. Mutants for these two factors exhibit hypersensitivity to heat stress, and under these conditions, UVH6 and MED14 are required for transcription of a high number of loci. We further show that MED14, but not UVH6, is required for transcription when heterochromatin silencing is destabilized in the absence of stress. In this case, MED14 requires proper chromatin patterns of repressive epigenetic marks for its function. We also uncover that MED14 regulates non-CG DNA methylation at a subset of RNA-directed DNA methylation target loci. These findings provide insight into the control of heterochromatin transcription upon silencing destabilization and identify MED14 as a regulator of DNA methylation.
- assay: DNA methylation
- assay: ChIP-seq
- research focus: chromatin & epigenetic regulation
- research focus: gene regulatory network inference
- research focus: differential expression
- approach: genetic perturbation / CRISPR
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