Holotomography reveals biophysical remodeling of mouse oocytes during post-ovulatory aging
M U KimiD, Chungha LeeiD, Jieun Do, Taeseop Shin, Daria Iliev, Kyoung Hee ChoiiD, So Yeon ShiniD, 고지은, Teodora PopaiD, Cristina Fontes Lindemann HickmaniD, Ji Hyang KimiD, YongKeun ParkiD
Abstract
Routine assessment of oocyte state in reproductive biology and clinical embryology still relies largely on two-dimensional transmitted-light morphology, leaving the underlying three-dimensional intracellular organization largely unmeasured. Here, we use holotomography to reconstruct volumetric refractive index (RI) distributions in unlabeled live mouse oocytes and combine this imaging with sparse-annotation, AI-assisted compartment segmentation and multidimensional feature extraction across geometry, RI statistics, dry-mass density, and intracellular texture. Applied to an in vitro model of post-ovulatory aging, holotomography-derived biophysical profiles separated fresh and aged oocytes more strongly than two-dimensional brightfield-derived features, and feature-family ablation indicated that non-morphological descriptors contributed substantially to this separation. At the population level, aged oocytes showed coordinated ooplasmic remodeling, including reduced volume, increased RI heterogeneity, and increased dry-mass density while total dry mass was broadly conserved. These findings demonstrate a label-free quantitative framework for detecting post-ovulatory aging-associated biophysical remodeling in intact mammalian oocytes. O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=167 SRC="FIGDIR/small/733271v1_ufig1.gif" ALT="Figure 1"> View larger version (89K): org.highwire.dtl.DTLVardef@c7257aorg.highwire.dtl.DTLVardef@6d92f0org.highwire.dtl.DTLVardef@1c9f7eborg.highwire.dtl.DTLVardef@b36637_HPS_FORMAT_FIGEXP M_FIG C_FIG
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 0
- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- 3D Mapping of Intact Ovaries Reveals the Aging Dynamics of the Ovarian Reserve
Arturo D’Angelo, Daniel Franco-Barranco, … Elvan Böke·bioRxiv·Nov 7, 2025
- Three-dimensional imaging and quantification of mouse ovarian follicles via optical coherence tomography
M. M. Amaral, A. Sun, … C. Zhou·bioRxiv·Jan 23, 2023
- Statistical image processing quantifies the changes in cytoplasmic texture associated with aging in Caenorhabditis elegans oocytes
Momoko Imakubo, Jun Takayama, … Shuichi Onami·BMC BioinformaticsPeer-reviewed·Feb 17, 2021
- Fertilization offsets the maternal age effect on mouse oocytes provided the oviduct is not itself aged
Michele Boiani, Thomas Nolte, … Hannes C.A. Drexler·bioRxiv·Nov 2, 2026
- Three-dimensional quantitative micro-elastography reveals alterations in spatial elasticity patterns of follicles and corpora lutea in murine ovaries during ageing
Anna Jaeschke, Matt S. Hepburn, … Chii Jou Chan·bioRxiv·Oct 8, 2024
- High-resolution 3D reconstruction of human oocytes using FIB-SEM.
Z. Trebichalska, J. Javurek, … Z. Holubcova·bioRxiv·Mar 30, 2021