bioRxivEcology
Decomposing variation in immune response in a wild rodent population
K. M. Wanelik, M. Begon, E. Arriero, J. E. Bradley, I. M. Friberg, J. A. Jackson, C. H. Taylor, S. Paterson
Abstract
Individuals vary in their immune response and, as a result, some are more susceptible to infectious disease than others. Little is known about which components of immune pathways are responsible for this variation, but understanding these underlying processes could allow us to predict the outcome of infection for an individual, and to manage their health more effectively. In this study, we describe transcriptome-wide variation in immune response (to a standardised challenge) in a wild population of field voles (Microtus agrestis). We find that this variation can be categorised into three main types. We also identify markers, across these three categories, which display particularly strong individual variation in response. This work shows how a simple standardised challenge performed on a natural population can reveal complex patterns of natural variation in immune response.
- organism: mouse
- assay: bulk RNA-seq
- research focus: host-pathogen & immune response
- approach: experimental assay
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Early-life immune expression profiles predict later life health and fitness in a wild rodent
K. M. Wanelik, M. Begon, … S. Paterson·bioRxiv·Oct 8, 2021
- Genetic and Environmental interactions contribute to immune variation in rewilded mice
O. O. Oyesola, A. E. Downie, … P. Loke·bioRxiv·Mar 17, 2023
- Housing laboratory mice deficient for Nod2 and Atg16l1 in a natural environment uncovers genetic and environmental contributions to immune variation.
J.-D. Lin, J. C. Devlin, … P. Loke·bioRxiv·Dec 9, 2019
- Gene expression variability across cells and species shapes innate immunity
T. Hagai, X. Chen, … S. A. Teichmann·bioRxiv·Sep 24, 2017
- The genetics of immune and infection phenotypes in wild mice, Mus musculus domesticus.
L. Cheynel, L. Lazarou, … M. Viney·bioRxiv·Jul 26, 2022
- Modeling and Characterization of Inter-Individual Variability in CD8 T Cell Responses in Mice
C. Audebert, D. Laubreton, … F. Crauste·bioRxiv·Jan 7, 2021