bioRxivPharmacology & Toxicology
Structural Insights into Dopamine Receptor-Ligand Interactions: From Agonists to Antagonists
Abstract
This study explores the intricacies of dopamine receptor-ligand interactions, focusing on the D1R and D5R subtypes. Using molecular modeling techniques, we investigate the binding of the pan-agonist rotigotine, revealing a universal binding mode at the orthosteric binding pocket (OBP). Additionally, we analyze the stability of antagonist-receptor complexes with SKF83566 and SCH23390. By examining the impact of specific mutations on ligand-receptor interactions through computational simulations and thermostability assays, we gain insights into binding stability. Our research also delves into the structural and energetic aspects of antagonist binding to D1R and D5R in their inactive states. These findings enhance our understanding of dopamine receptor pharmacology and hold promise for drug development in central nervous system disorders, opening doors to future research and innovation in this field.
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- The molecular mechanism of positive allosteric modulation at the dopamine D1 receptor
A. Goldberg, B. Xie, L. Shi·bioRxiv·Jul 27, 2023
- Structural Genomics of the Human Dopamine Receptor System
- Structural Dynamics of the Dopamine D2 Receptor with a Non-Basic Ligand
Qinxin Sun, Guodong He, … Agnieszka Anna Kaczor·bioRxiv·Feb 11, 2026
- Mechanism of dopamine binding and allosteric modulation of the human D1 dopamine receptor
Youwen Zhuang, Brian Krumm, … H. Eric Xu·Cell ResearchPeer-reviewed·Mar 9, 2021
- Distinct antagonist-bound inactive states underlie the divergence in the structures of the dopamine D2 and D3 receptors
J. R. Lane, A. M. Abramyan, … L. Shi·bioRxiv·May 17, 2019
- Revealing molecular determinants of ligand efficacy and affinity at the D2 dopamine receptor through molecular dynamics simulations
Yue Chen, Nour Aldin Kahlous, … Jens Carlsson·bioRxiv·Mar 30, 2025