RAB-35 and ARF-6 GTPases Mediate Engulfment and Clearance Following Linker Cell-Type Death
Abstract
Clearance of dying cells is essential for development and homeostasis. Conserved genes mediate apoptotic cell removal, but whether these genes also control non-apoptotic cell removal is a major open question. Linker cell-type death (LCD) is a prevalent non-apoptotic developmental cell death process with features conserved from C. elegans to vertebrates. Using microfluidics-based long-term in vivo imaging, we show that unlike apoptotic cells, the C. elegans linker cell, which dies by LCD, is competitively phagocytosed by two neighboring cells, resulting in cell splitting. Subsequent cell elimination does not require apoptotic engulfment genes. Rather, we find that RAB-35 GTPase is a key coordinator of competitive phagocytosis onset and linker cell degradation. RAB-35 binds CNT-1, an ARF-6 GTPase activating protein; removes ARF-6, a degradation inhibitor, from phagosome membranes; and recruits RAB-5 and RAB-7 GTPases for phagolysosome maturation. We propose that RAB-35 and ARF-6 drive an evolutionarily conserved program eliminating cells dying by LCD.
02 /Specification & Classification
Click any tag to browse matching papersReproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- RAB-35 aids apoptotic cell clearance by regulating cell corpse recognition and phagosome maturation
Ryan Haley, Ying Wang, Zheng Zhou·bioRxiv·Apr 13, 2018
- C. elegans CED-3 caspase promotes non-apoptotic linker cell dismantling but not death onset
Olya Yarychkivska, Lena M. Kutscher, … Shai Shaham·bioRxiv·Oct 15, 2025
- CDH-3/Cadherin, YAP-1/YAP and EGL-44/TEAD promote SYX-2/Syntaxin and EFF-1 fusogen-mediated phagosome closure
Alec Whited, Aladin Elkhalil, … Piya Ghose·GeneticsPeer-reviewed·Sep 3, 2025
- Autophagosomes fuse to phagosomes and facilitate the degradation of apoptotic cells in Caenorhabditis elegans
O. Pena-Ramos, L. Chiao, … Z. Zhou·bioRxiv·Jul 16, 2021
- C. elegans E3 ubiquitin ligase EBAX-1 promotes non-apoptotic linker cell-type death through target-directed miRNA degradation
Lauren Bayer Horowitz, Olya Yarychkivska, … Shai Shaham·bioRxiv·Jan 8, 2026
- The engulfment receptor CED-1/MEGF10 activates the GPCR LAT-1/ADGRL3 for apoptotic cell degradation
Fuqiao Liu, Lei Yuan, … Hui Xiao·bioRxiv·Jun 10, 2026