C. elegans E3 ubiquitin ligase EBAX-1 promotes non-apoptotic linker cell-type death through target-directed miRNA degradation
Lauren Bayer Horowitz, Olya Yarychkivska, Yun Lü, Shai Shaham
bioRxiv · Jan 8, 2026 · PreprintDevelopmental Biology
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Rockefeller UniversityORCID 0000-0002-3751-975XUnclaimed ORCID profile · follow to get notified of new preprints
17 papers
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Lauren Bayer Horowitz, Olya Yarychkivska, Yun Lü, Shai Shaham
bioRxiv · Jan 8, 2026 · PreprintDevelopmental Biology
Olya Yarychkivska, Simin Liu, Lauren Bayer Horowitz, Shiloh Newland, Peipei Wu, Saiya Mittal, Shogo Tamura, Tetiana Novosolova, David Faulkner Ritter, Yun Lu, Sevinç Ercan, Christopher M. Hammell, Shai Shaham
The paper identifies MYRF-1 as a regulator of non-apoptotic linker cell death in C. elegans, showing its role in priming death through activation of pqn-41/polyQ.
bioRxiv · Dec 11, 2025 · PreprintCell Biology
Nathan Rather, Aladin Elkhalil, Melvin Williams, Karen Juanez, Rashna Sharmin, Ginger Clark, Shai Shaham, Piya Ghose
This study identifies EOR-1/PLZF as a regulator of WAH-1/AIF, which sequentially promotes non-apoptotic corpse removal during development.
Cell Death Discovery · Nov 28, 2025Peer-reviewedCell Biology
Simin Liu, Kenneth Bradley, Jinghong J. Tang, Yoon A. Kim, Ana Milosevic, Shai Shaham
The paper identifies CEH-43/DLX as a key regulator of radial-glia-to-astrocyte trans-differentiation in C. elegans and mouse, showing its role in transcriptional convergence.
bioRxiv · Oct 17, 2025 · PreprintNeuroscience
Olya Yarychkivska, Lena M. Kutscher, Betty Ortiz Bido, Juliana Kagan, Yoon A. Kim, Dana Mamriev, Yun Lu, Elli Puscher, Wolfgang Keil, Sarit Larisch, Shai Shaham
The paper shows that CED-3 caspase in C. elegans promotes non-apoptotic linker cell dismantling but not death onset, and reveals similar mechanisms in mouse cells.
bioRxiv · Oct 15, 2025 · PreprintCell Biology
Rashna Sharmin, Aladin Elkhalil, Sara Pena, Pranya Gaddipati, Ginger Clark, Pavak Kirit Shah, Mark W. Pellegrino, Shai Shaham, Piya Ghose
The paper investigates the role of mitochondrial transport by kinesin motors in preventing localized calcium spiking and caspase-dependent cell death during specialized elimination in C. elegans neurons.
Current Biology · Sep 23, 2025Peer-reviewedCell Biology
Nikolaos Stefanakis, Jasmine Xi, Jessica Jiang, Shai Shaham
The paper identifies LET-381/FoxF and DMD-4/DMRT as regulators of HMC endothelial cell fate in C. elegans.
Development · Jul 15, 2025Peer-reviewedDevelopmental Biology
Katherine C. Varandas, Brianna M. Hodges, Lauren Lubeck, Amelia Farinas, Yupu Liang, Yun Lu, Shai Shaham
The paper shows that glia in C. elegans detect and respond to dendrite structure damage by altering gene expression and secreting proteins, with specific proteins required for this response.
Nature Communications · Jan 2, 2025Peer-reviewedNeuroscience
Ran Zhang, Patricia Rodriguez‐Rodriguez, Lucian Medrihan, Jerry C. Chang, Tatiana Ferraro, Pedro Del Cioppo Vasques, Wei Wang, Caroline Ménard, Flurin Cathomas, Kenny L. Chan, Lyonna F. Parise, Shai Shaham, Jean-Pierre Roussarie, Olga G. Troyanskaya, Scott J. Russo, Ana Milosevic
This study identifies astrocyte-derived extracellular matrix proteins, particularly SPARC, as regulators of synapse remodeling in stress-induced depression.
bioRxiv · Dec 30, 2024 · PreprintNeuroscience
Nikolaos Stefanakis, Jessica Jiang, Yupu Liang, Shai Shaham
This study identifies LET-381/FoxF and UNC-30/Pitx2 as key regulators of C. elegans mesodermal glia development and function, showing their role in motor behavior regulation.
The EMBO Journal · Feb 15, 2024Peer-reviewedNeuroscience
Itai Rieger, Guy Weintraub, Itamar Lev, Kesem Goldstein, Dana Bar-Zvi, Sarit Anava, Hila Gingold, Shai Shaham, Oded Rechavi
This study shows that small RNAs can be inherited transgenerationally in C. elegans without nuclear factors or chromatin changes, mediated by ZNFX-1 and germ granules.
bioRxiv · Jun 20, 2023 · PreprintGenetics
Alina Rashid, Maya Tevlin, Yun Lu, Shai Shaham
The paper identifies a cell-division-independent pathway for epithelial-to-motoneuron transformation in C. elegans, revealing regulatory mechanisms involving Notch, Ngn, and cytoskeletal genes.
Cell Reports · Sep 1, 2022Peer-reviewedNeuroscience
Itai Antoine Toker, Itamar Lev, Yael Mor, Yael Gurevich, Doron Fisher, Leah Houri-Zeevi, Olga Antonova, Hila Doron, Sarit Anava, Hila Gingold, Lilach Hadany, Shai Shaham, Oded Rechavi
The paper shows that inherited small RNAs in C. elegans regulate sexual attraction and outcrossing rates across generations, influencing population genetics under stress.
Developmental Cell · Feb 1, 2022Peer-reviewedMolecular Biology
Karolina Mizeracka, Julia M. Rogers, Jonathan D. Rumley, Shai Shaham, Martha L. Bulyk, John I. Murray, Maxwell G. Heiman
The paper identifies UNC-130 as a lineage-specific repressor that enables convergent differentiation in C. elegans by allowing proper specification of glial cells from distinct lineages.
bioRxiv · Aug 11, 2021 · PreprintDevelopmental Biology
Stephan A. Raiders, Erik Calvin Black, Andrea J. Bae, Stephen MacFarlane, Mason Klein, Shai Shaham, Aakanksha Singhvi
This study shows that glia actively engulf neuron fragments in C. elegans, affecting neuron shape and thermosensory behavior through a molecular pathway involving PS receptors and GTPase signaling.
eLife · Mar 24, 2021Peer-reviewedNeuroscience
In Hae Lee, Carl Procko, Yun Lu, Shai Shaham
Cell Reports · Jan 1, 2021Peer-reviewedNeuroscience
Menachem Katz, Francis Corson, Wolfgang W. Keil, Anupriya Singhal, Andrea J. Bae, Yun Lu, Yupu Liang, Shai Shaham
Nature Communications · Apr 23, 2019Peer-reviewedNeuroscience