Mechanical Profiling of Biopolymer Condensates through Acoustic Trapping
Kichitaro NakajimaiD, Tomas ŠneiderisiD, Nadia A. ErkampiD, Lydia L. GoodiD, Yuri Hideshima, Hirotsugu OgiiD, Tuomas P. J. KnowlesiD
Abstract
Characterizing the mechanical properties of single colloids is a central problem in soft matter physics. It also plays a key role in cell biology through biopolymer condensates, which function as membraneless compartments. Such systems can also malfunction, leading to the onset of a number of diseases, including many neurodegenerative diseases; the functional and pathological condensates are commonly differentiated by their mechanical signature. Probing the mechanical properties of biopolymer condensates at the single particle level has, however, remained challenging. In this study, we demonstrate that acoustic trapping can be used to profile the mechanical properties of single condensates in a contactless manner. We find that acoustic fields exert the acoustic radiation force on condensates, leading to their migration to a trapping point where acoustic potential energy is minimized. Furthermore, our results show that the Brownian motion fluctuation of condensates in an acoustic potential well is an accurate probe for their bulk modulus. We demonstrate that this framework can detect the change in the bulk modulus of polyadenylic acid condensates in response to changes in environmental conditions. Our results show that acoustic trapping opens up a novel path to profile the mechanical properties of soft colloids at the single particle level in a non-invasive manner with applications in biology, materials science, and beyond.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 2
- FWCI
- 1.56
- Field percentile
- top 15%
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Scanning probe microscopy elucidates gelation and rejuvenation of biomolecular condensates
Aida Naghilou, Oskar Armbruster, Alireza Mashaghi·Cell Reports Physical SciencePeer-reviewed·Feb 1, 2025
- Time-dependent material properties of ageing biomolecular condensates from different viscoelasticity measurements in molecular dynamics simulations
A. R. Tejedor, R. Collepardo-Guevara, … J. R. Espinosa·bioRxiv·Dec 7, 2022
- Elasticity generates indissoluble biomolecular condensates
- More than just oil droplets in water: surface tension and viscosity of protein condensates quantified by micropipette aspiration
H. Wang, F. M. Kelley, … Z. Shi·bioRxiv·May 28, 2021
- FlickerPrint: An Analysis Package for Measuring Interfacial Tension and Bending Rigidity of Biomolecular Condensates and Vesicles at Scale
Thomas A. Williamson, Jack O. Law, … Halim Kusumaatmaja·bioRxiv·Mar 24, 2025
- Biomolecular condensate viscoelasticity is dictated by the interplay between single-molecule shape memory and mesh reconfigurability
Pablo L. Garcia, Jerelle A. Joseph·bioRxiv·Oct 6, 2025