The EMBO JournalCell BiologyPeer-reviewed journal article
Notch Signaling Drives Pro-Regenerative and Migratory Traits in Glandular Stem/Progenitor Cells
Davide CinatiD, Rufina MaturiiD, Jeremy P Gunawan, Anne L. Jellema-de BruiniD, Laura KrachtiD, Paola Serrano MartineziD, Yi Wu, Abel Soto-GameziD, Marc‐Jan van Goethem, Inge R. HoltmaniD, Sarah A. PringleiD, Lara BarazzuoliD, Robert Paul CoppesiD
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Abstract
Organoid models have advanced our understanding of adult stem/progenitor cell dynamics and function. However, uncovering the regulatory mechanisms of scarce and often quiescent stem cells in organs like the salivary glands remains challenging. Using single-cell RNA sequencing and bulk ATAC and RNA-sequencing analysis, we conducted in-depth profiling of the cellular populations and key signaling pathways characterizing a mouse submandibular salivary gland organoid (mSGO) model at different temporal stages and in response to radiation damage. We identified Sox9- and Itgb1-expressing cells as the most primitive adult stem/progenitor populations and uncover novel stemness and migratory roles for Cd44-expressing cells. Moreover, we revealed that Notch signaling is essential for maintaining self-renewal and migration potential of these stem/progenitor cells post-irradiation. Extending these findings to patient-derived mSGOs, as well as murine and patient-derived mammary and thyroid gland organoids, we confirmed Notch signaling as a conserved regulator of stem/progenitor cell function under migrative and regenerative conditions.
- organism: mouse
- organism: human
- assay: scRNA-seq
- assay: bulk RNA-seq
- assay: ATAC-seq
- research focus: cell type annotation
- research focus: differential expression
- research focus: gene regulatory network inference
- research focus: cell-cell communication
- approach: experimental assay
- approach: statistical model
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