Mining the CRBN Target Space Redefines Rules for Molecular Glue-induced Neosubstrate Recognition
Georg PetzoldiD, Pablo GaínzaiD, Stefano AnnunziatoiD, Ilaria Lamberto, Peter TrenhiD, Laura A. McAllisteriD, Bradley DeMarco, Laura Schwander, R.D. BunkeriD, Mary Zlotosch, Rohitha SriramaratnamiD, Samuel GilbertoiD, Gerasimos LangousisiD, Etienne J. DonckèleiD, Chao QuaniD, Vaïk Strande, Gian Marco De DonatisiD, Shanique B. AlabiiD, Jessica Alers, Michelle MatysikiD, Camille Staehly, Aurélie Dubois, Arnaud Osmont, Mackenzie Garskovas, David LyoniD, , Sharon A. TownsoniD
Abstract
The CRL4CRBN ubiquitin ligase is leveraged by molecular glue degraders, small molecules that reprogram ligase specificity to induce degradation of clinically relevant neosubstrate proteins. Known CRBN neosubstrates share a generalizable {beta}-hairpin G-loop recognition motif, yet systematic exploration of the CRBN target landscape is still pending. Through computational mining of the human proteome using structure-based approaches, we predict over 1,400 CRBN-compatible {beta}-hairpin G-loop proteins across diverse target classes, identify novel mechanisms of neosubstrate recognition through structurally differentiated helical motifs and molecular surface mimicry, and validate 22 representative neosubstrates with clinical implications. This work broadens the CRBN target space, redefines rules for neosubstrate recognition and establishes a platform for the elimination of challenging drug targets by repurposing CRL4CRBN through next-generation molecular glue degraders.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 117
- FWCI
- 31.91
- Field percentile
- top 1%
- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Integrated proteomic screening reveals design principles of CRBN molecular glue degraders
Bachuki Shashikadze, Ines F. Scheller, … Martin Steger·bioRxiv·Mar 10, 2026
- Molecular surface mimicry enables CRBN to target G3BP2 for degradation
Stefano Annunziato, Chao Quan, … Georg Petzold·bioRxiv·Apr 30, 2025
- Tuning the open-close equilibrium of Cereblon with small molecules influences protein degradation
Suzanne O’Connor, Zoe J. Rutter, … Alessio Ciulli·bioRxiv·Dec 22, 2025
- Unbiased mapping of cereblon neosubstrate landscape by high-throughput proteomics
Martin Steger, Gisele Nishiguchi, … Zoran Ranković·Nature CommunicationsPeer-reviewed·Aug 20, 2025
- Mapping the latent CRBN-molecular glue degrader interactome
Pius Galli, Shuhao Xiao, … Nicolas H. Thomä·Nature BiotechnologyPeer-reviewed·Aug 13, 2026
- Unveiling the hidden interactome of CRBN molecular glues with chemoproteomics
Kheewoong Baek, Rebecca J. Metivier, … Eric S. Fischer·Nature CommunicationsPeer-reviewed·Jul 24, 2025