Nature CommunicationsImmunologyPeer-reviewed journal article
RANK-DEPENDENT CONTROL OF TUFT AND BEST4 CELL DEVELOPMENT IN THE INTESTINE
Reegan J. WillmsiD, Tori McCabe, Lena O. JonesiD, Ruth SchadeiD, Edan FoleyiD
Abstract
Specialist intestinal epithelial cells are critical for barrier integrity and immune responses at the mucosal boundary, yet the pathways that govern their development are incompletely defined. Here, we identify an essential role for TNFRSF11A/RANK in shaping intestinal epithelial specialization in zebrafish. Using lineage trajectory analysis, we identified two tuft cell subtypes, including a subtype enriched for expression of genes required to produce pro-inflammatory leukotrienes. We showed that RANK deficiency reduced the abundance of immune-regulatory tuft and BEST4 cells, increased goblet cell frequency, and promoted the accumulation of pro-inflammatory leukocytes in the gut. Functionally, we demonstrated that BEST4 cell numbers expand following infection with a pandemic strain of Vibrio cholerae, and that RANK deficiency enhances fish susceptibility to host colonization by Vibrio, implicating this lineage in host defenses against an enteric pathogen. Together, our findings implicate RANK signaling in intestinal epithelial diversification and immune regulation.
- organism: zebrafish
- assay: bulk RNA-seq
- research focus: cell type annotation
- approach: experimental assay
- Citations
- 4
- FWCI
- 7.95
- Field percentile
- top 4%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- RasGRP1 promotes efficient intestinal tuft cell differentiation
Lauren A. Shechtman, Philippe Depeille, … Jeroen P. Roose·bioRxiv·Oct 2, 2026
- Developmental regulation of intestinal best4+ cells
Abhinav Sur, Ella X. Segal, … Jeffrey A. Farrell·Genes & DevelopmentPeer-reviewed·Aug 7, 2026
- Commensal bacterial-derived retinoic acid primes host defense to intestinal infection
T. Alenghat, V. Woo, … B. A. Vallance·bioRxiv·Jan 27, 2021
- Toll-like receptor signalling via IRAK4 confers epithelial integrity and tightness through regulation of junctional tension
J. Peterson, K. Balogh Sivars, … K. Roeper·bioRxiv·Oct 25, 2021
- Notch receptors involved in the choice between intestinal secretory and enterocytes and differentiation of Bestrophin 4 cells.
Samah Allayati, Pijush Sutradhar, … Kenneth N. Wallace·Developmental BiologyPeer-reviewed·Aug 10, 2026
- Coincident epithelial signals restrain commensal-specific CD8αβ+ T cells in the intestine
Tayla M. Olsen, Matthew J. Dufort, … Oliver J. Harrison·bioRxiv·May 4, 2026