Journal of the American Chemical SocietyBiochemistryPeer-reviewed journal article
Bioorthogonal labeling and enrichment of histone monoaminylation reveal its accumulation and regulatory function in cancer cell chromatin
Nan ZhangiD, Jinghua WuiD, Farzana HossainiD, Haidong Peng, Huapeng LiiD, Connor Gibson, Min CheniD, Huan ZhangiD, Shuaixin GaoiD, Xinru Zheng, Yong‐Dong WangiD, Jiangjiang ZhuiD, Jing Jing WangiD, Ian S. MazeiD, Qingfei ZhengiD
Abstract
Histone monoaminylation (i.e., serotonylation and dopaminylation) is an emerging category of epigenetic mark occurring on the fifth glutamine (Q5) residue of H3 N-terminal tail, which plays significant roles in gene transcription. Current analysis of histone monoaminylation is mainly based on site-specific antibodies and mass spectrometry, which either lacks high resolution or is time-consuming. In this study, we report the development of chemical probes for bioorthogonal labeling and enrichment of histone serotonylation and dopaminylation. These probes were successfully applied for the monoaminylation analysis of in vitro biochemical assays, cells, and tissue samples. The enrichment of monoaminylated histones by the probes further confirmed the crosstalk between H3Q5 monoaminylation and H3K4 methylation. Finally, combining the ex vivo and in vitro analyses based on the developed probes, we have shown that both histone serotonylation and dopaminylation are highly enriched in tumor tissues that overexpress transglutaminase 2 (TGM2) and regulate the three-dimensional architecture of cellular chromatin. TOC O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=154 SRC="FIGDIR/small/586010v3_ufig1.gif" ALT="Figure 1"> View larger version (47K): org.highwire.dtl.DTLVardef@1bee3f7org.highwire.dtl.DTLVardef@1687013org.highwire.dtl.DTLVardef@1960bd0org.highwire.dtl.DTLVardef@1e19a04_HPS_FORMAT_FIGEXP M_FIG C_FIG
- organism: human
- assay: ChIP-seq
- research focus: chromatin & epigenetic regulation
- approach: experimental assay
- Citations
- 29
- FWCI
- 3.23
- Field percentile
- top 6%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Chemical proteomic profiling of protein dopaminylation in colorectal cancer cells
Nan Zhang, Shuaixin Gao, … Qingfei Zheng·Journal of Proteome ResearchPeer-reviewed·Jun 5, 2024
- Histone monoaminylation dynamics are regulated by a single enzyme and promote neural rhythmicity
Qingfei Zheng, Ryan M. Bastle, … Ian S. Maze·bioRxiv·Dec 6, 2022
- Chemical Proteomic Profiling of the Histaminylation Proteome in Cancer Cells Unveils Uncharted Epigenetic Marks on Core Histones
Xingyu Ma, Anne A Leaman, … Qingfei Zheng·Journal of the American Chemical SocietyPeer-reviewed·Aug 3, 2026
- Transglutaminase 3 is a Histone Monoaminylation Writer
Yvonne Ritsema, H. Li, … Qingfei Zheng·bioRxiv·Oct 21, 2026
- pH-Controlled chemoselective rapid azo-coupling reaction (CRACR) enables global profiling of serotonylation proteome in cancer cells
Nan Zhang, Jinghua Wu, … Qingfei Zheng·Journal of Proteome ResearchPeer-reviewed·Aug 29, 2024
- Regioselective Rapid Ene-type Reaction (RRER) Enables Bioconjugation of Histone Serotonylation
Jinghua Wu, Huapeng Li, … Qingfei Zheng·RSC Chemical BiologyPeer-reviewed·Jan 1, 2025